Gene Pfl01_2735 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2735 
Symbol 
ID3714476 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3153024 
End bp3153857 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content57% 
IMG OID 
Productphytanoyl-CoA dioxygenase 
Protein accessionYP_348466 
Protein GI77458960 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACTCT CTGTGCGAAA GGCGTTCCTG GAAGACGGGG CCGTCTTGAT CAAAGGTTTT 
CTGAGCAAAG ATCAATTGGC CGAGTGCCGT GCAGCCTACG ACTGGGCTGT TGAGAATCAT
GGCCCTCATG CGACTCGAAT GTTCGACGGA ACGGAGCAAC AGTCGCACGT CGACAACGCC
AATCCCGTTG CAAAGGCCCG TCTCGAAGAA CTGGTGGCTT CCCTACCCTT TGGCGAGCTG
TTTGCGCAGC TCTGGGGTTC GGAGAATGTG TGGTACTTCG CCGAAGAAGT GTTTCTCAAA
GCAGGTGGAC GCGGTTCTCG CACGCTTTGG CATCAGGACA CGTCTTATCT GCCTTGGGCC
GGAAACCATT GGGCGAATGC CTGGATCAGC TTTGAATCAG TGCCGAAGAA AAACGCTTTG
GAAATCGTTC GAGGTTCGCA CAAAGGACCA CGCTACGACG GCACCACGTT TCGCGATCCG
AATGATCCGA CTCAACCGCT GCATGGCGGC GATGCATTGC CACGCCTGCC GGACATCGAG
GCTTTGCGGC AAAACGATCC TGAGGCATTC GAGATCATTT CGTGGGCCAC CGAGCCTGGC
GATATCCTCC TGCTGCATCC GGGTTCGCTG CATGGCGGCG CTCCGGTGGA TGAAGCCTTC
CCGGACCGTC ACACCTTCGT TTTCCGTTTC TTTGGCGACG ACGCCACCTT CCATCCCTTG
CCAGAACACA GCGCCGGCGG TTATCCGCAG CAAGGCGTGC TGTTCACTGA AGAGCTGTCG
ACGCTGAAAG CGGGAGACGC CTTCCGCCAC CCAACGTTCC GCCAATTAAT ATAA
 
Protein sequence
MQLSVRKAFL EDGAVLIKGF LSKDQLAECR AAYDWAVENH GPHATRMFDG TEQQSHVDNA 
NPVAKARLEE LVASLPFGEL FAQLWGSENV WYFAEEVFLK AGGRGSRTLW HQDTSYLPWA
GNHWANAWIS FESVPKKNAL EIVRGSHKGP RYDGTTFRDP NDPTQPLHGG DALPRLPDIE
ALRQNDPEAF EIISWATEPG DILLLHPGSL HGGAPVDEAF PDRHTFVFRF FGDDATFHPL
PEHSAGGYPQ QGVLFTEELS TLKAGDAFRH PTFRQLI