Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_2730 |
Symbol | |
ID | 3714425 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 3147214 |
End bp | 3147723 |
Gene Length | 510 bp |
Protein Length | 169 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | |
Product | cytidine/deoxycytidylate deaminase, zinc-binding region |
Protein accession | YP_348461 |
Protein GI | 77458955 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCAAT TGACTGAACT CATCCCGGCT GGCATCAGCG CGCTTGATCT GACGTTACTG CGCCAGACCA TTGCCTTGTC CGAGGCATCG AAGCAACGCG GTCGCCATCC GTTCGCGGCA TTGGTGGCCG ACCGCAACGG CAAGGTGATT GTCGAAGCGG GGAACAACTC GATGCCCCCG GAAGGTGATC CAACCCAGCA TGCCGAGTTG GTGGCAGCGG CGGCAGCGGC AAAACTCCTG TCGCCGCAGG AGTTGGAACT GTGCACGCTG TACACCAGCG CCGAGCCATG CTGCATGTGC GCCGGCGCGG TGTATTGGAC GGGGATCGGA CGTGTGGTCT ATGCCTTGTC GGAGCATGCC TTGCTGGGAC TGACGGGGGA CCATCCGGAG AATCCGACGT TCTCGCTGCC GTGCCGCGAG GTGTTCGCCA AGGGGCAACG TAAGGTCAGT GTGTTGGGGC CGATGCTGGA GGGGGAGGCG GCTGAACCGC ACAGGGGGTT TTGGTCGTAA
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Protein sequence | MNQLTELIPA GISALDLTLL RQTIALSEAS KQRGRHPFAA LVADRNGKVI VEAGNNSMPP EGDPTQHAEL VAAAAAAKLL SPQELELCTL YTSAEPCCMC AGAVYWTGIG RVVYALSEHA LLGLTGDHPE NPTFSLPCRE VFAKGQRKVS VLGPMLEGEA AEPHRGFWS
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