Gene Pfl01_2730 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2730 
Symbol 
ID3714425 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3147214 
End bp3147723 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content62% 
IMG OID 
Productcytidine/deoxycytidylate deaminase, zinc-binding region 
Protein accessionYP_348461 
Protein GI77458955 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCAAT TGACTGAACT CATCCCGGCT GGCATCAGCG CGCTTGATCT GACGTTACTG 
CGCCAGACCA TTGCCTTGTC CGAGGCATCG AAGCAACGCG GTCGCCATCC GTTCGCGGCA
TTGGTGGCCG ACCGCAACGG CAAGGTGATT GTCGAAGCGG GGAACAACTC GATGCCCCCG
GAAGGTGATC CAACCCAGCA TGCCGAGTTG GTGGCAGCGG CGGCAGCGGC AAAACTCCTG
TCGCCGCAGG AGTTGGAACT GTGCACGCTG TACACCAGCG CCGAGCCATG CTGCATGTGC
GCCGGCGCGG TGTATTGGAC GGGGATCGGA CGTGTGGTCT ATGCCTTGTC GGAGCATGCC
TTGCTGGGAC TGACGGGGGA CCATCCGGAG AATCCGACGT TCTCGCTGCC GTGCCGCGAG
GTGTTCGCCA AGGGGCAACG TAAGGTCAGT GTGTTGGGGC CGATGCTGGA GGGGGAGGCG
GCTGAACCGC ACAGGGGGTT TTGGTCGTAA
 
Protein sequence
MNQLTELIPA GISALDLTLL RQTIALSEAS KQRGRHPFAA LVADRNGKVI VEAGNNSMPP 
EGDPTQHAEL VAAAAAAKLL SPQELELCTL YTSAEPCCMC AGAVYWTGIG RVVYALSEHA
LLGLTGDHPE NPTFSLPCRE VFAKGQRKVS VLGPMLEGEA AEPHRGFWS