| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_2727 |
|---|
| Symbol | |
|---|
| ID | 3714422 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | + |
|---|
| Start bp | 3143895 |
|---|
| End bp | 3144653 |
|---|
| Gene Length | 759 bp |
|---|
| Protein Length | 252 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | |
|---|
| Product | Short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_348458 |
|---|
| Protein GI | 77458952 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 0.932234 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGGTA AATTCAGTGA TCAGGTTGCC GTCGTGACCG GCGGTTCCAC AGGGATCGGG
TTTTCCATCG CGCAAGCCTT GATCGCCGAG GGCGCCAAAC GCGTTTACAT CACTGCACGG
GCAGCAGACA GGCTGGAGGC GGCAGTTGCC AGACTCGGCG ACAAAGCTGT CGCGGTGGTT
TCCGATGTCT CGCGTCAGGC TGATCTCGAC GCGCTCAAAG CGACAATCCA AACGCGCGAC
GATCGGCTGG ACGCAGTGTT CGCAAATGCC GGGATCTGTG AGAAAAATCC GCTCGGAGAG
ACCAGCGAGG CTGCTTACTA CGCCATGTTC GACGTGAACG TGAAAGGCGT TTTCTTCAGC
GTTCAAACGC TTCTTCCGTT GATGAAAGAC GCTTCGTCCA TCGTCTTGAC TGCCTCAATC
TGCTCCAGCA ACGGCATGGA AGGATTGAGT CTGTACAACG CGTCGAAGGC GGCGGTCCGA
TCGTTTGCAC GCACGTGGGC CAATGAACTC AAGGACCGCA AAATCCGCGC AAACGTGTTG
AGCCCTGGCT TCACCCGCAC ACCGCTGATG GACAACGGGC TGAAAATGAG CGAGAGCGAC
ATTGCCGCGC TACGCCAGCA CGTCGAGCAA ATCACGCCAT TGGGCTACAT GGCGCAACCC
GAAGAAATTG CCAGCGCGGC ACTGTTTCTC GCCTCGGACG ACGCCAGATA CGTGAACGGC
GTGGAGCTGA TGGTCGATGG TGGTTTATCG CAAATCTGA
|
|---|
| Protein sequence | MSGKFSDQVA VVTGGSTGIG FSIAQALIAE GAKRVYITAR AADRLEAAVA RLGDKAVAVV
SDVSRQADLD ALKATIQTRD DRLDAVFANA GICEKNPLGE TSEAAYYAMF DVNVKGVFFS
VQTLLPLMKD ASSIVLTASI CSSNGMEGLS LYNASKAAVR SFARTWANEL KDRKIRANVL
SPGFTRTPLM DNGLKMSESD IAALRQHVEQ ITPLGYMAQP EEIASAALFL ASDDARYVNG
VELMVDGGLS QI
|
|---|
| |