Gene Pfl01_2710 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2710 
Symbol 
ID3714405 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3123380 
End bp3125575 
Gene Length2196 bp 
Protein Length731 aa 
Translation table11 
GC content60% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_348441 
Protein GI77458935 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.579153 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAATCA AGGTCAATTT TCTCGACAAC CTCCGACTCG AAGCCAAGTT CGATGACTTC 
ACGGTGGTGG CCGACCAACC GATCCGTTAC AAGGGCGATG GCTCTGCTCC GGGTCCGTTC
GACTATTTCC TGGCGTCTTC GGCCTTGTGC GCGGCTTACT TCGTAAAGTT GTACTGCAGC
ACCCGCAATA TCCCGACCGA AAACATTCGT CTGTCGCAGA ACAACATTGT CGATCCGGAA
AACCGCTACA ACCAGATCTT CAAAATCCAG GTCGAGCTGC CGGCGGACAT TTCCGAAAAG
GATCGCCAGG GCATCCTGCG CTCGATCGAC CGTTGCACGG TGAAGAAGGT GGTGCAGGCC
GGGCCAGAGT TCGTGATCGA GGAAGTCGAG AACCTCGACG CCGATGCCCA GGCCCTGCTG
ATGCCGGCTT CCACGTCCGG CGCGGGCACC TGCATTGCCG GCAAGGACCT GCCGCTGGAA
CAGACCATCG CCAATATGTC GGGGATTCTG GCCGACCTGG GCATGAAGAT CGAAATCGCT
TCGTGGCGCA ACATCGTGCC CAACGTCTGG TCGCTGCACA TCCGCGATGC GCAGTCGCCG
ATGTGCTTCA CCAACGGCAA GGGTGCGACC AAAGAGGGCG CGCTGGCCTC GGCGCTGGGC
GAGTTCATCG AGCGGCTGAA CTGCAACTTC TTCTACAACG ATCAGTTCTG GGGCGAAGAG
ATCGCCAATG CCGAGTTCGT GCATTACCCG GACGAGCGCT GGTTCAAGCC CGGCGCCAAA
GACGAGTTGC CTGCGGAAAT CCTCGACGAA TATTGCCTGG GCATTTACAA CCGCGACGGC
GAACTGCGCG GCTCGCACCT GTACGACACC AACTCCGGCA ACACCCAGCG CGGTATCTGC
TCGCTGCCGT TCGTGCGTCA GTCTGACGGC GAGGTGGTGT ACTTTCCGTC CAACCTGATC
GAAAACCTGT TTCTCAGCAA CGGCATGAGC GCCGGCAACA CCCTGGCTGA AGCCCAGGTG
CAGTGCCTGT CGGAAATCTT CGAGCGGGCG GTCAAACGCG AAATCCTCGA AGGCGAAATG
GCCCTGCCGG ATGTACCGCA AGAGGTGCTG GCGAAGTACC CGGGCATCCT CGCCGGGATC
AAGGCGCTGG AAGAGCAGGG TTTCCCGGTG CTGGTCAAGG ACGCGTCGCT GGGCGGTGAG
TTCCCGGTGA TGTGCGTGAC GCTGATGAAC CCGCGCACCG GCGGCGTGTT CGCCTCGTTC
GGCGCGCACC CGAGCTTCGA AGTGGCGCTG GAACGCAGCC TCACCGAGTT GCTGCAGGGC
CGCAGCTTCG AAGGCCTCAA CGATCTGCCA CAGCCGACCT TCTCGGGCCA GGCTGTGACG
GAGCCGAACA ACTTCGTGGA GCACTTCATC GATTCCAGCG GCGTGGTGTC GTGGCGCTTC
TTCAGCGCCA AAGCCGACTT CGAATTCGTC GAGTGGGACT TCTCCGGCAA CGGCGAAAAC
TCCAACGCCG AAGAGGCCGC GACGTTGTTC GGCATCCTTG AAGACATGGG CAAGGAAGTC
TACATGGCGG TCTACGAGCA CATCGGCGCC AAGGCGTGCC GCATTCTGGT GCCGGACTAT
TCGGAGATCT ATCCGGTAGA AGACCTGATC TGGGACAACA CCAACAAAGC GCTGCAATTC
CGTGCGGATA TCCTCAACCT GCACAACCTG AGCAAAGTCG GCCTGCGCAA CCTCGCCAAA
GGCCTGGAAC ACAGTGAACT GGACGATTAC ACCGACATCA CCACGCTGAT CGGCATCGAG
TTTGACGACA ACACCCCATG GGGCAAGTTG ACCATTCTCG AACTGCGCCT GCTGATCTAC
CTCGCCTTGC AGAAGTACGA GCAGGCCAAG GATCTGGTCG AAGCCTTCCT GCAATACAAC
GACAACACCG TCGAGCGCGG CTTGTTCTAT CAAGCGGTCA ACGTTGTGCT GGAAATGGAG
CTGGACGAGG ATCTGCAGTT GGAAGACTAC GAAGCCAACT TCCGCCGCAT GTTCGGCGAC
GAGCGCATGG ATGCGGCGAT CGGTTCGGTC AACGGCAGCG TGCGCTTCTA CGGCCTGACG
CCGACCAGCA TGAAGCTGGA AGGGCTGGAT CGGCACCTGC GCCTGATCGA GAGCTACAAG
AAACTGCACG CAGCGCGGGC CAACTTCGCG GGTTGA
 
Protein sequence
MEIKVNFLDN LRLEAKFDDF TVVADQPIRY KGDGSAPGPF DYFLASSALC AAYFVKLYCS 
TRNIPTENIR LSQNNIVDPE NRYNQIFKIQ VELPADISEK DRQGILRSID RCTVKKVVQA
GPEFVIEEVE NLDADAQALL MPASTSGAGT CIAGKDLPLE QTIANMSGIL ADLGMKIEIA
SWRNIVPNVW SLHIRDAQSP MCFTNGKGAT KEGALASALG EFIERLNCNF FYNDQFWGEE
IANAEFVHYP DERWFKPGAK DELPAEILDE YCLGIYNRDG ELRGSHLYDT NSGNTQRGIC
SLPFVRQSDG EVVYFPSNLI ENLFLSNGMS AGNTLAEAQV QCLSEIFERA VKREILEGEM
ALPDVPQEVL AKYPGILAGI KALEEQGFPV LVKDASLGGE FPVMCVTLMN PRTGGVFASF
GAHPSFEVAL ERSLTELLQG RSFEGLNDLP QPTFSGQAVT EPNNFVEHFI DSSGVVSWRF
FSAKADFEFV EWDFSGNGEN SNAEEAATLF GILEDMGKEV YMAVYEHIGA KACRILVPDY
SEIYPVEDLI WDNTNKALQF RADILNLHNL SKVGLRNLAK GLEHSELDDY TDITTLIGIE
FDDNTPWGKL TILELRLLIY LALQKYEQAK DLVEAFLQYN DNTVERGLFY QAVNVVLEME
LDEDLQLEDY EANFRRMFGD ERMDAAIGSV NGSVRFYGLT PTSMKLEGLD RHLRLIESYK
KLHAARANFA G