Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_2706 |
Symbol | |
ID | 3714401 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 3115774 |
End bp | 3117180 |
Gene Length | 1407 bp |
Protein Length | 468 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | |
Product | selenocysteine synthase |
Protein accession | YP_348437 |
Protein GI | 77458931 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.277049 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGTGA GTGTTGCCCT GCGGTTACCG TCGATTGACA GCCTGTTACG CCACCCCGCG TGCCAGCCAT TGGCCGAGCG TTACGGACGC GAGGCGCTGT TGACGGGGTT TCGCCAGTTA CTGGATGACT TGCGCGAAGC GGTGGTGGCG GGGCAACTGA CCGCCGTTGA AATCAGCCCT GAAGCGCTGG CCGGAAGAGT TGCCGAACGT CTGGCATTGA AGCAGCGCAG CCAGGTGCGC CGGGTGTTCA ACCTGACCGG CACCGTGCTG CACACCAACC TCGGCCGGGC TTTGTTGCCC GAAGAAGCCA TTGACGCCGT GCAACTGGCG GCGCGCTATC CCTTGAACCT GGAATTCGAT CTGGCCAGCG GCAAGCGCGG TGACCGCGAC GACTTGATCG AAGGCCTGAT CCGCGAGCTG ACCGGCGCCG AAGCCGTGAC CGTGGTCAAC AACAATGCCG CCGCCGTGCT GCTGACGCTC AACAGCCTCG GCGCTCGCAA GGAAGGCATC ATTTCCCGGG GCGAGCTGAT CGAGATCGGC GGCGCGTTTC GCATTCCCGA CATCATGAGC CGCGCCGGCG TGCGCCTGCA CGAGGTCGGC ACCACCAATC GCACCCATGC CCGCGACTAC GAGGCGGCAA TCAGCCCACG CAGCGGCCTG ATCATGCGCG TGCACGCGAG CAACTACAGC ATCGAAGGCT TCACCGCCCG GGTGCCGACC TCCGAACTGG CGGCGTTGGC CCATCGGCAT GACCTGCCGC TGCTGGAAGA TCTTGGGAGC GGCAGTCTGC TGGACCTGAC CCGCTGGGGT TTGCCGGCGG AACCGACGGT GCGTCAAGCG TTGCTTGATG GCGCCGACAT CGTCACCTTC AGCGGCGACA AACTGCTTGG CGGGCCGCAG GCGGGGGTGA TCGTCGGGCG CAAGGACCTG ATCGCGAAGA TCAAGAAGAA CCCGCTGAAA CGCGCGTTGC GGGTCGACAA ACTGACGCTG GCCGCACTCG AAGCGGTACT CGGGCTCTAT CGCGACCCGG ATCGTCTGGC CGAGCGTTTG CCGAGCCTGC GCCTGTTGAC CCGACCGCAA GCCGACATTC TGGCCCAGGC CGAACGCCTG CAACCGGCCT TGGCCGAACT GCTGGGCGAG GGCTGGATCG TCACGGCGCA GCCAGCGCTG GGCATGATCG GTAGCGGCAG CCAACCGGTG GCGCGCCTGC CGAGCGCAGC GCTGTGTCTG CGCCCACAGG TATCGAAACG CCTGCGCGGA CGTTGCCTGT TGAATCTGGA AGCCGCGCTG CGCGCCTTGC CGATCCCGGT GCTCGGGCGC ATCGATGACG ACGCGCTGTG GCTGGATCTG CGGCAGCTCG ACGATGAACC GGCGTGGCTG GCGCAACTCG GGCAGTTGCA AACGTGA
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Protein sequence | MSVSVALRLP SIDSLLRHPA CQPLAERYGR EALLTGFRQL LDDLREAVVA GQLTAVEISP EALAGRVAER LALKQRSQVR RVFNLTGTVL HTNLGRALLP EEAIDAVQLA ARYPLNLEFD LASGKRGDRD DLIEGLIREL TGAEAVTVVN NNAAAVLLTL NSLGARKEGI ISRGELIEIG GAFRIPDIMS RAGVRLHEVG TTNRTHARDY EAAISPRSGL IMRVHASNYS IEGFTARVPT SELAALAHRH DLPLLEDLGS GSLLDLTRWG LPAEPTVRQA LLDGADIVTF SGDKLLGGPQ AGVIVGRKDL IAKIKKNPLK RALRVDKLTL AALEAVLGLY RDPDRLAERL PSLRLLTRPQ ADILAQAERL QPALAELLGE GWIVTAQPAL GMIGSGSQPV ARLPSAALCL RPQVSKRLRG RCLLNLEAAL RALPIPVLGR IDDDALWLDL RQLDDEPAWL AQLGQLQT
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