Gene Pfl01_2706 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2706 
Symbol 
ID3714401 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3115774 
End bp3117180 
Gene Length1407 bp 
Protein Length468 aa 
Translation table11 
GC content66% 
IMG OID 
Productselenocysteine synthase 
Protein accessionYP_348437 
Protein GI77458931 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.277049 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGTGA GTGTTGCCCT GCGGTTACCG TCGATTGACA GCCTGTTACG CCACCCCGCG 
TGCCAGCCAT TGGCCGAGCG TTACGGACGC GAGGCGCTGT TGACGGGGTT TCGCCAGTTA
CTGGATGACT TGCGCGAAGC GGTGGTGGCG GGGCAACTGA CCGCCGTTGA AATCAGCCCT
GAAGCGCTGG CCGGAAGAGT TGCCGAACGT CTGGCATTGA AGCAGCGCAG CCAGGTGCGC
CGGGTGTTCA ACCTGACCGG CACCGTGCTG CACACCAACC TCGGCCGGGC TTTGTTGCCC
GAAGAAGCCA TTGACGCCGT GCAACTGGCG GCGCGCTATC CCTTGAACCT GGAATTCGAT
CTGGCCAGCG GCAAGCGCGG TGACCGCGAC GACTTGATCG AAGGCCTGAT CCGCGAGCTG
ACCGGCGCCG AAGCCGTGAC CGTGGTCAAC AACAATGCCG CCGCCGTGCT GCTGACGCTC
AACAGCCTCG GCGCTCGCAA GGAAGGCATC ATTTCCCGGG GCGAGCTGAT CGAGATCGGC
GGCGCGTTTC GCATTCCCGA CATCATGAGC CGCGCCGGCG TGCGCCTGCA CGAGGTCGGC
ACCACCAATC GCACCCATGC CCGCGACTAC GAGGCGGCAA TCAGCCCACG CAGCGGCCTG
ATCATGCGCG TGCACGCGAG CAACTACAGC ATCGAAGGCT TCACCGCCCG GGTGCCGACC
TCCGAACTGG CGGCGTTGGC CCATCGGCAT GACCTGCCGC TGCTGGAAGA TCTTGGGAGC
GGCAGTCTGC TGGACCTGAC CCGCTGGGGT TTGCCGGCGG AACCGACGGT GCGTCAAGCG
TTGCTTGATG GCGCCGACAT CGTCACCTTC AGCGGCGACA AACTGCTTGG CGGGCCGCAG
GCGGGGGTGA TCGTCGGGCG CAAGGACCTG ATCGCGAAGA TCAAGAAGAA CCCGCTGAAA
CGCGCGTTGC GGGTCGACAA ACTGACGCTG GCCGCACTCG AAGCGGTACT CGGGCTCTAT
CGCGACCCGG ATCGTCTGGC CGAGCGTTTG CCGAGCCTGC GCCTGTTGAC CCGACCGCAA
GCCGACATTC TGGCCCAGGC CGAACGCCTG CAACCGGCCT TGGCCGAACT GCTGGGCGAG
GGCTGGATCG TCACGGCGCA GCCAGCGCTG GGCATGATCG GTAGCGGCAG CCAACCGGTG
GCGCGCCTGC CGAGCGCAGC GCTGTGTCTG CGCCCACAGG TATCGAAACG CCTGCGCGGA
CGTTGCCTGT TGAATCTGGA AGCCGCGCTG CGCGCCTTGC CGATCCCGGT GCTCGGGCGC
ATCGATGACG ACGCGCTGTG GCTGGATCTG CGGCAGCTCG ACGATGAACC GGCGTGGCTG
GCGCAACTCG GGCAGTTGCA AACGTGA
 
Protein sequence
MSVSVALRLP SIDSLLRHPA CQPLAERYGR EALLTGFRQL LDDLREAVVA GQLTAVEISP 
EALAGRVAER LALKQRSQVR RVFNLTGTVL HTNLGRALLP EEAIDAVQLA ARYPLNLEFD
LASGKRGDRD DLIEGLIREL TGAEAVTVVN NNAAAVLLTL NSLGARKEGI ISRGELIEIG
GAFRIPDIMS RAGVRLHEVG TTNRTHARDY EAAISPRSGL IMRVHASNYS IEGFTARVPT
SELAALAHRH DLPLLEDLGS GSLLDLTRWG LPAEPTVRQA LLDGADIVTF SGDKLLGGPQ
AGVIVGRKDL IAKIKKNPLK RALRVDKLTL AALEAVLGLY RDPDRLAERL PSLRLLTRPQ
ADILAQAERL QPALAELLGE GWIVTAQPAL GMIGSGSQPV ARLPSAALCL RPQVSKRLRG
RCLLNLEAAL RALPIPVLGR IDDDALWLDL RQLDDEPAWL AQLGQLQT