Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_2696 |
Symbol | |
ID | 3714391 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 3105440 |
End bp | 3106627 |
Gene Length | 1188 bp |
Protein Length | 395 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | |
Product | aminotransferase, class I and II |
Protein accession | YP_348427 |
Protein GI | 77458921 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00745131 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCGGGCA CGACCCATCT CCGCCTTCAG AGACCGCGCA TGACTTTCGA TTTTGATCAG GTATTCGACC GCCACGACAC CGGCAGCACC AAGTGGAGCC GCTACCCGGC CGACGTGTTG CCGATGTGGG TCGCTGACAT GGATTTCGCC GCCCCGCCGG TGGTCATCGA GGCGCTGCAA CAACGTCTGC TGCACCCGTT GGTGGGCTAC AGCGTGGCCC AGGACAACCT GCGCGAGGCC ATCGTCGCCG ACCTCTGGAA CAAGTTCGCC TGGCGCGTGA AACCGCAAGA GCTGATCTTC CTGCCGGGCG TGGAGTCGGG TTTCAACATG GCGCTCAAGG CGCTGGTGCA ACCGCAGCAG AACGTCGTGG TGCAAACCCC GAACTACCCG CCGCTGCGCC ATGCACCGGG CCATTGGGGC CTGAACAAGG TCGAGCTGGA ATTCAACGCC CAGGCCGACG GCACCTACGC TACCCCGCTG GACGCCTTGC GTGAATCCCT GCACGGCGGC GGCGCCCTGC TCCTGAGCAA CCCGCACAAC CCGATCGGCA AGGTCTTCGG CCGCGAAGAA CTGCAAGCGG TGGCGGACAT CTGCGTGGCC CAGGACGCCT GGATCATCTC CGACGAAATC CACGCCGAGC TGTGCTACGA CGGTCGCGTA CACATTCCGA CCGCCTCCCT GAGCCCGGAA ATCGCCCGCC GCACCATCAC CCTGATGTCG GCGAGCAAGG CCTACAACAT CGCCGGTCTC AAGACTTCGT TCATGATCAT CCAGGACGCC GCCCTGCGCG AACGCGTCAA CCACGCCCGT TGCGGCATGG TCGACAGCGT CAACCCGCTG GGCATGGAAG CCACGCGCGT GGCCTACAGC GAAGCCGGTC CGTGGCTTGA GGCGCTGAAG CAGTATCTGC AAGCCAACCG TGACTGGCTG GTGGACGCGG TGCGCAACCG CTTGCCCGGC GTAACCCTCA ATGTGCCGCA AGGCACGTAT CTGGCCTGGC TCGATTGCTC GGCGCTGGAT CTGGACGATC CGCAGAAGTT CTTCCTGGAC CACGCTCGCG TCGGCCTCAG CCCGGGTCTG GACTTTGGTG ACCACAGCCA GCAATTCGTG CGCCTGAACT TCGGTTGCCC GCGCTCGATG CTCGAAGAAG GCATTGCGCG GATGGAGCGA GCCCTCAAGT CCCGGTAA
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Protein sequence | MAGTTHLRLQ RPRMTFDFDQ VFDRHDTGST KWSRYPADVL PMWVADMDFA APPVVIEALQ QRLLHPLVGY SVAQDNLREA IVADLWNKFA WRVKPQELIF LPGVESGFNM ALKALVQPQQ NVVVQTPNYP PLRHAPGHWG LNKVELEFNA QADGTYATPL DALRESLHGG GALLLSNPHN PIGKVFGREE LQAVADICVA QDAWIISDEI HAELCYDGRV HIPTASLSPE IARRTITLMS ASKAYNIAGL KTSFMIIQDA ALRERVNHAR CGMVDSVNPL GMEATRVAYS EAGPWLEALK QYLQANRDWL VDAVRNRLPG VTLNVPQGTY LAWLDCSALD LDDPQKFFLD HARVGLSPGL DFGDHSQQFV RLNFGCPRSM LEEGIARMER ALKSR
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