Gene Pfl01_2691 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2691 
Symbol 
ID3714366 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3099826 
End bp3101745 
Gene Length1920 bp 
Protein Length639 aa 
Translation table11 
GC content61% 
IMG OID 
ProductPAS/PAC sensor hybrid histidine kinase 
Protein accessionYP_348422 
Protein GI77458916 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00727931 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCGAGA ACAAGAAGTC CGCTGCAATC GAAGACATGC GTTTTCGTTT GCTGATCGAT 
GCGGTGGTCG ATTATGCGAT CTACATGATC GACCCCGAGG GGATCATTAC CAGCTGGAAC
TCCGGCGCCA AGCGCTTCAA GGGATATGAA GAGGCGGAGA TCCTCGGCGA ACACTTTTCC
CGGTTCTACA CCGATGAAGA CCGTGCCAAC GGTTTGCCAC AGCGGGCACT CGACACGGCA
ATTCGTGAAG GCCGGTTCGA GGGGGAAGGC TGGCGGGTAC GCAAGGACGG CACGCATTTC
TGGTGCCACG TGGTGATCGA CCCGATTTTC AGCCCGAGCG GGCAACTGCT CGGGTTTGCC
AAGATTACCC GCGACCTGAC CGACCGCAAG ATGGCCGAAG AAACCCTCAA GCAGAGCGAA
CAGCAGTTTC GCCTGCTGGT GCAGGGCGTC ACCGACTATG CGATCTACAT GCTGAGCCCC
GAAGGCCGGG TGACCAATTG GAACCCCGGC GCGCAGCGGA TCAAGGGTTA CAAGCCGGAT
GAGGTCATCG GCCAGCACTT CTCGATGTTC TACACCCCGG AAGACCGTGA GGCCGGTGAA
CCCCAGCGGG CCCTGGAAAC CGCGGTGCGT GAGGGCCGTT TCGAGAACAA GAGCTGGCGC
CTGCGCAAGG ATGGCACGCG GTTTCTGGCC CATGTGGTGG TCGATGCGAT TCGCGGCGAC
ACCGGCACCT TGCTCGGTTT TGCCAAGATT ACCCGCGACG TCACCGAAGC CACCCAGGCG
CAGCAGGCTC TGGAGAAAAC CCGTGAAGCG CTGTTCCAGG CGCAGAAAAT GCAGGCTATT
GGCCAACTCA GCGGCGGCAT TGCTCACGAC TTCAACAATT TGCTGACGGT GATCCTCGGT
AATCTGGAGA TCGTGCGCAA ACGCGTAGGC GACGACCCGA AAGTCAGCCG TCTGCTGGAG
AACGCCACGC AGGGCGCATT GCGCGGCGTG TCGCTGACCC AACGCATGCT GGCCTTCGCC
CGGCGTCAGG AGCTCAAGAC CGAACCGATC GAAATCCCGA AACTGGTGCA GGGCATCACC
GGGCTGTTGC GCAGCTCACT GGGGCCGGGG ATCCGCATCG AAACGCAGTT TCCCGAAGAC
CTGCAAGCGG TGCTGGCCGA CAGCAACCAA CTGGAGCTTG CGGTACTCAA TCTGGCGACC
AACGCCCGCG ACGCCATGCC CGAAGGCGGC AGCGTCACCA TCAGTGCCGA ACCCGAAGTG
GTGCTCGAAC AGAACGATTC AACTCTGGCG GCAGGGCGCT ATGTCTGCCT GAGGGTGAAC
GATACCGGTG AGGGCATGGA CGCTGAAACG CTGGCGTCGG CAACCGATCC GTTTTTCACC
ACCAAAGGCT TGGGCAAGGG CACGGGTCTG GGGTTGTCGA TGGTCCATGG CTTCATCGAA
CAACTGGGTG GCCGCTTCAT TCTGAAAAGC ACCCAGGGGC AGGGCACCAC CGCTGAGCTG
TGGTTGCCGG TGGCCATCGA CGGTGTTGTC GCCAAACCGC TTGGCCCGAT GGTGTCCACC
GATTCGGTGC CGCGCCTCAG CGTGCTGGTG GTGGATGATG ACAGTCTGGT GCTCACCAGC
ACGGTTCTGC TGCTGGAAGA CCTCGGCCAT CGGGTGCTCA GCGCCACTTC CGGCGCCCAG
GCGCTGGAGC TGTTCGATCA AGGCGAGGTC ATCGATCTGA TGATCACCGA CATGGCCATG
CCACAGATGA GTGGCGCGCA ACTGGCTCAC GCCGTGCGCC TGCTCAAGCC GGATCTGCCG
ATCATCCTCG CCACCGGCTA TGCCGAACGC CTCGAGGGTT TTGCAGCAGG GCTGCCGCGG
CTGTCGAAAC CGTTCAATCA GCTGAATCTG GTGGAGATCA TTGCCCGGTC GATGAAGTGA
 
Protein sequence
MSENKKSAAI EDMRFRLLID AVVDYAIYMI DPEGIITSWN SGAKRFKGYE EAEILGEHFS 
RFYTDEDRAN GLPQRALDTA IREGRFEGEG WRVRKDGTHF WCHVVIDPIF SPSGQLLGFA
KITRDLTDRK MAEETLKQSE QQFRLLVQGV TDYAIYMLSP EGRVTNWNPG AQRIKGYKPD
EVIGQHFSMF YTPEDREAGE PQRALETAVR EGRFENKSWR LRKDGTRFLA HVVVDAIRGD
TGTLLGFAKI TRDVTEATQA QQALEKTREA LFQAQKMQAI GQLSGGIAHD FNNLLTVILG
NLEIVRKRVG DDPKVSRLLE NATQGALRGV SLTQRMLAFA RRQELKTEPI EIPKLVQGIT
GLLRSSLGPG IRIETQFPED LQAVLADSNQ LELAVLNLAT NARDAMPEGG SVTISAEPEV
VLEQNDSTLA AGRYVCLRVN DTGEGMDAET LASATDPFFT TKGLGKGTGL GLSMVHGFIE
QLGGRFILKS TQGQGTTAEL WLPVAIDGVV AKPLGPMVST DSVPRLSVLV VDDDSLVLTS
TVLLLEDLGH RVLSATSGAQ ALELFDQGEV IDLMITDMAM PQMSGAQLAH AVRLLKPDLP
IILATGYAER LEGFAAGLPR LSKPFNQLNL VEIIARSMK