Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_2689 |
Symbol | |
ID | 3714364 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 3095848 |
End bp | 3097500 |
Gene Length | 1653 bp |
Protein Length | 550 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_348420 |
Protein GI | 77458914 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.000324564 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGACTGCCA ATCCCCTCGA CGACCCGTTC TATTACCTCA ACAACTTCCG CCAGGTGCTT GATTGGCTTG AGCTTCGTTA CGCCGATGTC ATGAGCGAAG CGGAGCACGC CTTCATCCGC GACTTCAAGA CACTGCCGCG CGGATCCCAG GGATTGCTGG TGCGGATGGT GATGCGCAAG GGCGTGCATT TTCGCGCCGG CAAGCTGAAT TATCCGGAAA TCGGCGACAT CGCCGAGGCG GCGCAACCGC TGCTGGATCA CGGCTGGCTC GATGAACAGG CGCCGTTGTC GATGGCGGAT CTGTTCGAGG TGTTGCTCAA GGCCGAGATC CTGCAAGCCT TCGGCCCGGC CATCGACCAG CCCCGAGGCA AGAAAGTCGA CTGGCTGCCG CTGCTGCACG ACCGATTTCC CGAGCCCCGC AGTTTCCGGC AATGGTGCCC GGCGCTGGCG GACCGGCTGC TCAGCCTGAC ATTGATGGAC CTGTGCGATC GTTTTCGCCT GATGTTCTTC GGCAACCTCT ATCAGGACTG GTCGGAGTTC GTGCTCGCCG ATCTCGGCAT CTTCACTTAT GAGAAAGTCG AATTCAGCGC CGATTCCCGG GGCTTGCGCA GCCGCGCGGA CGTCGACGCC TGCCTGTTTC TGCACGACTG CCAGCTGTAT TTCGAAGCCG GCGAGCCGCT GGAGCCGATC GTCGAACAGG TCGCGGCGCT GCATTTCGAC AACCCGTGGC TGCAACGCCG GCGCGGCAAG CTGTTGTTCC AGATCGGCCA ATACTGCGAG CGCCTCGGCG AATTCGCCCT GGCCCTGAAG ATCTATCGCG ACTGCGCCTA TCCCGGCGCT CGATTGCGGA TGATCCGCGT GCTGGAGCGC AGCGCCGAAT ATGCGCTTGC CCTGGAACTG GCGTTCATTG CCGAACAGGC GCCGGAAACC GCCACCGAAC AGCAAGGCTT GCAACGGATA TTGCCGCGTT TGCGGCGCAA GCTCGGGGGG CCGCCGATCA AACGTACGGC GCCGGGCATG GTGGAACGAC TGGATCTGCA CCTGCCGCGT CTCGATCCGG CATTGTCGGT GGAATATCAC GTTCAGGCGC ACCTGCACGA AGAAACGGGG CCGGTGCATT ACGTGGAAAA CAGCCTGATC AATTCACTGT TCGGCCTGCT GTGCTGGCCG GCGATCTTCG CGCCATTGCC GGGCGCGTTC TTTCACCCGT TCCAGCGCGG ACCAGTGGAT CTGCTCAATG AAGACTTCCA GCCGCGCCGC GCCGAGCTGT TCCAGGCCTG TCTGGCCGAA CTTGACGATG GCCGTTATGC CGACACCATC CGCGCGCGGT TCGCCGCCAA ATGGGGCGTG CAGTCGCCGT TCGTCTTCTG GGGCGCGCTC AATGAAGAAC TGCTGGAGCA GGCTTTGGCC TGCCTGCCGG CCGAACACCT CAAGCACTGG TTCAGCCGTC TGCTGCTGGA CATCAAGGCC AATCGCGCCG GCATGCCCGA CCTGATCCAG TTCTGGCCGC AGCACAAGAC CTACCGGATG ATCGAAGTCA AAGGCCCGGG CGATCGGCTG CAAGACAATC AATTGCGCTG GCTGGAGTTC TGCCACACGC ACCGGATGCC GATCGCCGTA TGTTACGTGC AATGGGCGGA GCAGGGCGCT TGA
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Protein sequence | MTANPLDDPF YYLNNFRQVL DWLELRYADV MSEAEHAFIR DFKTLPRGSQ GLLVRMVMRK GVHFRAGKLN YPEIGDIAEA AQPLLDHGWL DEQAPLSMAD LFEVLLKAEI LQAFGPAIDQ PRGKKVDWLP LLHDRFPEPR SFRQWCPALA DRLLSLTLMD LCDRFRLMFF GNLYQDWSEF VLADLGIFTY EKVEFSADSR GLRSRADVDA CLFLHDCQLY FEAGEPLEPI VEQVAALHFD NPWLQRRRGK LLFQIGQYCE RLGEFALALK IYRDCAYPGA RLRMIRVLER SAEYALALEL AFIAEQAPET ATEQQGLQRI LPRLRRKLGG PPIKRTAPGM VERLDLHLPR LDPALSVEYH VQAHLHEETG PVHYVENSLI NSLFGLLCWP AIFAPLPGAF FHPFQRGPVD LLNEDFQPRR AELFQACLAE LDDGRYADTI RARFAAKWGV QSPFVFWGAL NEELLEQALA CLPAEHLKHW FSRLLLDIKA NRAGMPDLIQ FWPQHKTYRM IEVKGPGDRL QDNQLRWLEF CHTHRMPIAV CYVQWAEQGA
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