| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_2686 |
|---|
| Symbol | |
|---|
| ID | 3714361 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | + |
|---|
| Start bp | 3092982 |
|---|
| End bp | 3094835 |
|---|
| Gene Length | 1854 bp |
|---|
| Protein Length | 617 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | |
|---|
| Product | lipase, class 3 |
|---|
| Protein accession | YP_348417 |
|---|
| Protein GI | 77458911 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.458877 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 0 |
|---|
| Fosmid unclonability p-value | 0.0000292693 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | unclonable |
|---|
| |
Sequence |
| Gene sequence | ATGGGTGTGT ATGACTACAA GAACTTCGGT ACGGCGGAAT CCAAGGCGCT GTTCAGCGAT
GCCATGGCCA TTACGCTGTA TTCCTACCAC AACCTCGATA ACGGCTTTGC CGTCGGTTAT
CAGCACAACG GCTTCGGCCT CGGTTTGCCG GCCACGCTGG TGACCGCGCT GATCGGCGGT
ACGGATTCCC AGGGGGTGAT CCCCGGCATT CCGTGGAACC CCGATTCGGA AAAAGCCGCA
CTCGACGCGG TGAAAAAAGC CGGCTGGACC CCGATCACCG CCGCGCAACT GGGTTACGAG
GGCAAGACCG ATGCGCGCGG CACCTTTTTC GGCGAAAAAG CCGGCTACAC CAGCGCTCAG
GTAGAAATCC TCGGCAAATA CGACGCTCAG GGCCATCTGA CGGAAATCGG CATTGCCTTT
CGCGGCACCA GTGGCCCACG GGAAATCCTG ATTGGCGACT CCATCGGTGA CGTGATCAAC
GACTTGCTCG CCGCATTCGG GCCCAAGGAT TACGCCAAGA ACTACGTCGG CGAGGCCTTT
GGCAACCTGA TGAACGATGT GGTGGCGTTC GCCAAGGCCA ACGGCCTGAG CGGCAAGGAC
GTGCTGGTCA GCGGTCACAG CCTCGGCGGG CTGGCGGTCA ACAGCATGGC GGACTTGAGC
ACCAGCAAAT GGAGCGGGTT CTTCCAGGAT TCCAACTACA TCGCCTACGC CTCGCCGACC
CAGAGCAGCA CCGACAAGGT GCTCAACGTC GGCTATGAAA ACGATCCGGT GTTCCGCGCC
CTCGACGGCT CGAACTTCAC CGGCGCCTCG CTCGGTGTGC ACGACGCGCC GAAGGAGTCG
GCGACCGACA ACATCGTCAG CTTCAACGAC CACTACGCCT CGGCGGCGTG GAACGTGCTG
CCGTTCTCGA TCGTCAACAT TCCGACCTGG ATCTCGCATC TGCCGACCGC TTATGGCGAA
GGCATGAACC GGGTGATCGA GTCGAAGTTC TACGACCTGA CCAGCAAGGA TTCGACGATC
ATCGTCGCCA ACCTGTCGGA TCCGGCGCGG GCCAACACCT GGGTGCAGGA CCTGAACCGC
AACGCCGAAA CCCACAAGGG CAGCACGTTC ATCATCGGCA GCGACGGCAA CGACTTGATC
CAGGGCGGCA GCGGCAACGA TTATCTGGAG GGCCGCGCCG GCAACGACAC GTTCCGCGAC
GGTGGGGGCT ACAACATCCT GCTCGGCGGC TCGGGCAACA ACACCCTGGA GTTGCAGAAG
TCGGTCAATA GCTTCGACTT CGCCAACGAC GGCGCCGGCA ACCTGTACAT CCGCGATGCC
AACGGCGGAA TCAGCATCAC CCGCGACATC GGCAGCATCG TCACCAAGGA GCCGGGCTTC
CTCTGGGGCC TGTTCAAGGA CGACGTGACC CACAGCGTCA CGGCGGCCGG TCTTAAGGTC
GGCAACAACG TCACCCAGTA CGAATCGAGC GTGAAGGGCA CCGGCGGTGC CGACACCCTC
AAGGCCAAGG CCAGCGGAGA CTGGCTGTTC GGCCTGGACG GCAACGACCA TCTGATCGGC
GGGGCGGGCA ACGACGTGTT CGTCGGCGGC GCCGGCAATG ATCTGATGGA GTCGGGCGGC
GGGGCGGATA CCTTCCTGTT CAACGGCGCA TTCGGCCAGG ATCGCGTGGT GGGTTACACC
GCCAACGACA AACTGGTGTT CCTCGGCGTG CAGGGGGTGT TGCCGGGCGA CGACTTGCGC
GCACACGCCA CGGCGGTGGG GCAGGATACG GTGCTGAAGT TTGGCGCTGA TTCGGTAACG
CTGGTCGGGG TTGCCTTGAA CAGCCTGAGT GCCGACGGGA TCGTGATCGC CTGA
|
|---|
| Protein sequence | MGVYDYKNFG TAESKALFSD AMAITLYSYH NLDNGFAVGY QHNGFGLGLP ATLVTALIGG
TDSQGVIPGI PWNPDSEKAA LDAVKKAGWT PITAAQLGYE GKTDARGTFF GEKAGYTSAQ
VEILGKYDAQ GHLTEIGIAF RGTSGPREIL IGDSIGDVIN DLLAAFGPKD YAKNYVGEAF
GNLMNDVVAF AKANGLSGKD VLVSGHSLGG LAVNSMADLS TSKWSGFFQD SNYIAYASPT
QSSTDKVLNV GYENDPVFRA LDGSNFTGAS LGVHDAPKES ATDNIVSFND HYASAAWNVL
PFSIVNIPTW ISHLPTAYGE GMNRVIESKF YDLTSKDSTI IVANLSDPAR ANTWVQDLNR
NAETHKGSTF IIGSDGNDLI QGGSGNDYLE GRAGNDTFRD GGGYNILLGG SGNNTLELQK
SVNSFDFAND GAGNLYIRDA NGGISITRDI GSIVTKEPGF LWGLFKDDVT HSVTAAGLKV
GNNVTQYESS VKGTGGADTL KAKASGDWLF GLDGNDHLIG GAGNDVFVGG AGNDLMESGG
GADTFLFNGA FGQDRVVGYT ANDKLVFLGV QGVLPGDDLR AHATAVGQDT VLKFGADSVT
LVGVALNSLS ADGIVIA
|
|---|
| |