| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_2682 |
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| Symbol | |
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| ID | 3714357 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | + |
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| Start bp | 3083608 |
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| End bp | 3084963 |
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| Gene Length | 1356 bp |
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| Protein Length | 451 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | |
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| Product | Type I secretion outer membrane protein, TolC |
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| Protein accession | YP_348413 |
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| Protein GI | 77458907 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.829421 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000293137 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAATAAGC TTTCCATGCT GGCTGCAGCG CTCGCGCTGC TTGCGGGCAA CAGTGCAGTG
GCGGCCATGG GGCCGTTCGA GATCTACGAA CAGGCGTTGC GCAATGACCC GGTGTTCCTC
GGCGCGATCA AGGAGCGCGA CGCCGGCCTT GAAAACCGCG CCATCGGCCG CGCCGGCCTG
TTGCCGAAAC TGGGTTACAA CTACAACAAG GGTCGCAACT CGTCGAAGGC CACGTCCCTC
GACGAACGCG CGCGCAATCG CACCGATGAG CGTAATTACA ACAGCTACGG CTCGAGCCTG
ACCCTGCAAC AACCGTTGCT CGACTACGAA GCCTACGCGG CCTATCGCAA GGGCGTGGCC
CAGTCACTGT TTGCCGACGA AAACTTTCGC GGCAAGAGCC AGGAGCTTCT GGTTCGAGTA
CTGGATAACT ACACCAAGGC CTTGTTTGCC CAGGATCAGA TCGACATCGC GCAGGCCAAG
AAGAAAGCGT ACGAGCAGCA GTTCCAGCAG AACGAGCACA TGTTCAAGCA GGGCGAGGGT
ACTCGTACGG ACATCCTTGA AGCCGAGTCG CGTTACGAAC TGGCGACCGC CGAGGAAATC
GAGGCCCGCG ACGAGCAGGA TGCCGCGCTA CGGGAGCTGG GCGCATTGGT AGGCGTGCCG
GCGATGGACA TCAGTGACCT GGCCCCGTTG GATCAGAACT TCCAGACCTT TGCCTTGATG
CCGGCCAACT ACGACACCTG GCACGAGCTG GCGGTCAGCA ATAACCCGAA CCTTGCGTCC
CAGCGTCAGG CGGTTGAAGT GGCGCGGTAC GAAGTCGAGC GCAACCGCGC CGGGCACCTG
CCGAAAGTCA GCGCTTACGC CACGATGCGC CAGAACGAGT CGGAAAGCGG CAACACCTAC
AACCAGCGTT ACGAAACCAA CACCATCGGT TTCGAAGTCA GCGTGCCGTT GTATGCCGGT
GGCGGCGTGT CGGCTTCGAC CCGTCAGGCC AGCCGCACCA TGGAACAGGC CGAATACGAA
CTGGACGGCA AGACCCGCGA GACGCTGATC GAATTGCGCC GGCAGTTCAG TGCGTGCCTG
TCCGGGGTCA ATAAATTGCG CGCCTATCAA AAGGCCCTGG CCTCGGCCGA AGCGCTGGTG
GTGTCGACCA AACAGAGCAT TCTCGGCGGC GAGCGCACCA ACCTCGACGC CCTGAACGCC
GAACAACAGC TGTTTACCAC CCGCCGTGAT CTTGCCCAGG CCCGCTACGA CTACCTTATG
GCTTGGACCA AATTGCATTA CTACGCGGGC ACCTTGAGCG AACAGGATTT GGCGCGGGTG
GATGAGGCGT TCGGACAGGG TCCACGGATG CAATAA
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| Protein sequence | MNKLSMLAAA LALLAGNSAV AAMGPFEIYE QALRNDPVFL GAIKERDAGL ENRAIGRAGL
LPKLGYNYNK GRNSSKATSL DERARNRTDE RNYNSYGSSL TLQQPLLDYE AYAAYRKGVA
QSLFADENFR GKSQELLVRV LDNYTKALFA QDQIDIAQAK KKAYEQQFQQ NEHMFKQGEG
TRTDILEAES RYELATAEEI EARDEQDAAL RELGALVGVP AMDISDLAPL DQNFQTFALM
PANYDTWHEL AVSNNPNLAS QRQAVEVARY EVERNRAGHL PKVSAYATMR QNESESGNTY
NQRYETNTIG FEVSVPLYAG GGVSASTRQA SRTMEQAEYE LDGKTRETLI ELRRQFSACL
SGVNKLRAYQ KALASAEALV VSTKQSILGG ERTNLDALNA EQQLFTTRRD LAQARYDYLM
AWTKLHYYAG TLSEQDLARV DEAFGQGPRM Q
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