Gene Pfl01_2677 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2677 
Symbol 
ID3714352 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3076797 
End bp3077882 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content59% 
IMG OID 
Productextracellular solute-binding protein 
Protein accessionYP_348408 
Protein GI77458902 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0163621 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCGAA AGACCCTCGC GCTCGCACCC TTGATGCTCG CCGTCTCCTT CGCTCAGGCG 
GCGGATACGG TCAAGGTTTA CAACTGGTCC GACTACATCG CGCCGGACAC CGCCAAGAAC
TTCGAAAAGG CCAGCGGCAT CGGCGTCACC TATGACGTCT ACGACAGCAA CGAAACCCTC
GACGGCAAGC TGATGACCGG CAAATCCGGT TACGACGTGG TGTTTCCCTC CAACCACTTC
ATGGCGCGGC AGATCGAGGG CGGGGCACTG AAGAAACTCG ACAAGAGCCA GTTGCCGAAC
TGGAAGAACC TCAACCCGGT ATTGCTCAAG GCCTTGCAGA CCAACGATCC GGGTAACGAA
CACGGTTTTC CGTACCTGTG GGGCAGCACT GGCATCGGCT ACAACGTCGC CAAGGTCAAG
GCCGTGCTGG GTGACAACGC GCCGGTGGAT TCCTGGGATC TGATCTTCAA ACCCGAATAC
ATGGAAAAAC TGCAGAAGTG CGGCGTGGCC ATCCTCGACA ACGGCCCGGA ACTGCTGCCG
GCGGCGCTCA ACTACCTGGG TTTGCCGCAT CACAGCAAGA ACCCCGAGGA CTACAAGAAA
GCTGAAGCAC TGCTGATGAA AGTGCGGCCG TACGTCAGCT ATTTCCATTC CTCGAAGTAC
ACCAGCGATC TGGCCAATGG CGACATTTGC GTGGCCGTCG GTTTCTCCGG CGACATCCTG
CAAGCGGAAA ACCGCGCCAA AGAAGCGAAG AACGGCATCG ACATCGGCTA CGAGATTCCC
AAGGAAGGCG CCGCCATCTG GTTCGACATG GTCGCCATGC CGGCCGACGC GCCGGACGAG
AAGGCCGGCT ACGCGTTCAT GAACTACCTG CTGCAGCCCG ACGTGATGGC CGGCATCAGC
AACTACGTGC ATTACGCCAA TGGCAACGAA CAGGCTGACA GCCTGATCGA CCCGGCGATC
AAGAACGACA CCAAGGTGTA TCCGAGCCCG GAAATGATGG GCAAGCTGTT CGCACTGGAA
GCGATGCCGC TGAACATCGA CCGGATCCGC ACGCGGGTGT GGAACAAGAT TCGTACTGGC
AGCTGA
 
Protein sequence
MIRKTLALAP LMLAVSFAQA ADTVKVYNWS DYIAPDTAKN FEKASGIGVT YDVYDSNETL 
DGKLMTGKSG YDVVFPSNHF MARQIEGGAL KKLDKSQLPN WKNLNPVLLK ALQTNDPGNE
HGFPYLWGST GIGYNVAKVK AVLGDNAPVD SWDLIFKPEY MEKLQKCGVA ILDNGPELLP
AALNYLGLPH HSKNPEDYKK AEALLMKVRP YVSYFHSSKY TSDLANGDIC VAVGFSGDIL
QAENRAKEAK NGIDIGYEIP KEGAAIWFDM VAMPADAPDE KAGYAFMNYL LQPDVMAGIS
NYVHYANGNE QADSLIDPAI KNDTKVYPSP EMMGKLFALE AMPLNIDRIR TRVWNKIRTG
S