Gene Pfl01_2646 details

Gene Information

• Locus tag: Pfl01_2646
• ID: 3714287
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas fluorescens Pf0-1
• Kingdom: Bacteria
• Replicon accession: NC_007492
• Strand: +
• Start bp: 3031385
• End bp: 3034876
• Gene Length: 3492 bp
• Protein Length: 1163 aa
• Translation table: 11
• GC content: 60%
• Product: multi-sensor hybrid histidine kinase
• Protein accession: YP_348377
• Protein GI: 77458871

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 9
• Fosmid unclonability p-value: 0.898724
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGTCCTCTC CGTCTTCGGT TGATGAGCAA CGGTTCCGCA AACTCCTGAG CCGCAACGTC 
AGTTTGCCGT TGGGCGTCGG CGTCATCAGT GCCGTGTTCT TCGTTTCGCT GATCACCTAT 
TTGTTGTCGG TTATCCAGTG GGTGGAGCAC ACCGACCGGG TGATCAATAA CGCCAACGAA 
GCGGTGAAAC TCACCGTGGA TCTGGAAACC GGCATGCGCG GGTATCTGCT CAGCGGCGAC 
GAGCATTTCC TCGATCCGTA CGAGACGGCC AAGCCTCGCA TTGCTGTGGC TCTGAATACC 
TTGCTTGAAC TGACTGCCGA CAATCCGGCT CAAACCGACC GCCTGCGTCG TCTTCAGGCG 
CTGCAAACCG AGTGGGCGAC GTATGCGCAG TCGATGATCG ATCTGCAACG CGCGAGCGGT 
GATTACAAGT CCGCGGTCAA AGCGGGGAAG GGCAAGCGCC TGACCGACGA AATACGTAAA 
CAGTTCGAAG ATGTAATTGA AACCGAACAG TTGCTGCGTG CTTCACGCAA CGAAGACGTG 
CGCCGCACCA CGATCTGGAG CATCAGCCTT TATCTGCTGT TTGTGGCCGG TATCAGCGGT 
CTGCTGGCCT ATGTCGGTCG GCGCGATCTG GTCAACCTGT CGCAAAGCTA TGGCGCGACC 
CTGGCGGCGC AAGAGGCCAG TGCAAAACGT CTGGAACAGC AAGCCTGGTT GCGCAACGGC 
CAGACCCAGC TCGCCGAACA AGTGCTGGGG CAACTGACGG TCAATCTGCT GGGGCGCAAT 
ATCCTGCAGT TCTGCGCCCA GTATCTCGGC AGCGCCGTGG CCGCGCTGTA TGTACGCGAG 
GAACATGGCG GCCTCAAACG CGTGGCGACT TATGGCTTCT CCCGCGAACA GGAACAACAG 
AACCAATCGA TCTACAGCGA AGAAGGTCTG GTCGGGCAGG TCGCTCAGCA GGCTCGGCTG 
ATTCGTCTCG ACTCGGTGCC GTCCGACTAT TTCAAGGTCA GTTCGGGTCT GGGCGAGGGC 
CTGCCGCGCA GCGTGCTGGT AGTGCCGACC AGTGATGACG AGCGGGTCAA CGGCGTGATC 
GAACTGGGCT TCCTGCGTCC GCTCACCGAC CGTGATGTGG CGTTGCTGGA ACTGATCGCC 
GGCAATATCG GCACGTCTAT AGAAGCGGCG CGATACCGTC AGCGTTTGCA GGAAGTGCTG 
GCCGAAACCC AGCAACTCAA CGAAGAGTTG CAGGTGCAGC AGGAAGAGCT GAAAACCGCC 
AACGAAGAGC TGGAAGAACA GTCGCGGATT CTCAAGGAAT CCCAGGCGCA TCTGGAAACC 
CAGCAAGTCG AGCTGGAGCA GACCAACGAA CAATTGGCCG AACAGGCCCA GACCCTGGCC 
GAGCAGCGCG ACGCCATGGA TCAGAAGAAC ACCGAGCTCA ATCAGGCGCA GGTGCAGCTC 
GAAGAACGCG CCGAAGAGTT GCAGCGTTCT AGCAAGTACA AATCCGAATT CCTCGCCAAC 
ATGTCCCACG AACTGCGCAC GCCGCTGAAC AGTTCGCTGA TCCTGGCCAA GCTGCTGGCG 
GAAAACCCGC AGGAAAACCT CAGCGCCGAG CAGGTCAAGT TTGCCGAGTC GATCTATTCC 
GCCGGCAACG ACCTGCTCAA CCTGATCAAC GACATTCTCG ATATTTCCAA GGTGGAAGCC 
GGCAAGCTCG AAGTGATGCC GGAAAACACC AGTGTCGCGC GCCTGGCCGA CGGTTTGCGC 
GGGATGTTCG AACCGCTGGC GGCAGTCAAG CAACTCGCAT TCAGTGTCCA GTTGCAGCCC 
GATGCGCCGA GTACGCTGTT CACCGACCGC CAGCGTCTGG AACAGGTGAT CAAGAACCTG 
CTGTCCAACG CCGTGAAATT CACCGAGCAC GGCACCGTCA GCCTGACCAT TGCCGGTCAG 
CCGGACGACC GCATTGCCTT CATCGTGCGC GATTCGGGTA TCGGGATCGC GGCAGACCAG 
CAGGAAAGCA TTTTCGAAGC CTTCCGCCAG GCCGACGGCA CCACCAACCG CAAATACGGC 
GGCACTGGCT TGGGCCTGTC GATTTCCCGG GATCTGGCGA CGCTGTTGGG CGGCTCGATC 
AGCGTCAGCA GCGCGCCGGG GCAGGGCAGT GTCTTCACCC TGGTGCTGCC GCAGCACTAC 
CGCGAACCGG GCGACGCGCC TGTCGCGCCG CTAACGTTCA GCCCGCCAGC CGCCGCTCCG 
GTCATGGCAT CCGCTGTAGC GGTTTCGCCG CTGGCCTCTG TCGAGATTCC GCGCTTCAAC 
GATGACCGCG ATAAAGCGCC GTTCAATACC CGCTGCATTC TGGTGGTGGA AGACGAACCG 
AATTTCGCCC ATATCCTCTA CGACCTCGCC CATGAACTGG GTTATCAGTG CCTGGTTGCC 
CACGGCGCCG ATGAAGGCTA TGACCTGGCG AAAGAGTTCG TGCCGGACGC GATCCTGCTG 
GACATGCGCC TGCCGGATCA TTCGGGCCTG ACCGTTCTGC AACGCCTGAA AGAACACGCC 
GGAACCCGCC ACATCCCGGT GCACGTGATT TCCGTGGAAG ACCGCGTCGA AGCGGCCATG 
CACATGGGCG CCATCGGTTA CGCGGTCAAG CCGACTACCC GTGAAGAGCT CAAGGACGTG 
TTCGCCCGTC TTGAAGCGAA GCTCACCCAG AAGGTCAAAC GCGTGCTGCT GGTCGAGGAC 
GACGATCTGC AACGGGAAAG CATCGCTCGG CTGATCGGCG ACGACGACAT CGAAATCACC 
GCCGTCGGCC TGGCGCAGGA CGCACTGGAG CTACTGCGCA CGACGATCTT CGATTGCATG 
GTCATCGACC TGAAGCTGCC GGACATGCTT GGCAACGACC TGCTCAAACG CATGTCCACC 
GAGGACATCT GCTCGTTCCC GCCTGTCATC GTCTATACCG GGCGTAACCT GACCCGCGAC 
GAAGAGGCCG ACCTGCGCAA GTATTCGCGT TCGATCATCA TCAAGGGCGC CCGCTCGCCA 
GAGCGTCTGC TGGACGAGGT CACACTCTTT CTGCACAAAG TCGAATCGCA GTTGTCCCAT 
GAACGGCAGA AGATGCTCAA GACCGCCCGC AGTCGCGACA AGGTCTTCGA AGGCCGCAAA 
GTGCTGCTGG TGGACGACGA TGTACGCAAC ATCTTCGCCC TGACCAGTGC GCTGGAAACC 
AAGGGTGCAG TCGTGGTGAT CGGTCGAAAC GGTCGTGAAG CGATTGAAAA ACTGAATGAA 
GTCGAGGACA TCGACCTGGT GCTGATGGAC GTGATGATGC CGGAAATGGA TGGTTTCGAA 
GCCACCATGG AAATCCGCAA GGATCCGCGC TGGCGCAAGC TGCCGATCAT CGCGGTGACG 
GCCAAGGCCA TGAAGGACGA TCAGGAGCGC TGCCTGCAGG CGGGCGCCAA TGATTACCTG 
GCCAAGCCCA TTGACCTGGA TCGCCTGTTC TCGCTGATTC GCGTGTGGTT GCCGAAGATG 
GAACGCATTT AG 

 

Protein sequence

MSSPSSVDEQ RFRKLLSRNV SLPLGVGVIS AVFFVSLITY LLSVIQWVEH TDRVINNANE 
AVKLTVDLET GMRGYLLSGD EHFLDPYETA KPRIAVALNT LLELTADNPA QTDRLRRLQA 
LQTEWATYAQ SMIDLQRASG DYKSAVKAGK GKRLTDEIRK QFEDVIETEQ LLRASRNEDV 
RRTTIWSISL YLLFVAGISG LLAYVGRRDL VNLSQSYGAT LAAQEASAKR LEQQAWLRNG 
QTQLAEQVLG QLTVNLLGRN ILQFCAQYLG SAVAALYVRE EHGGLKRVAT YGFSREQEQQ 
NQSIYSEEGL VGQVAQQARL IRLDSVPSDY FKVSSGLGEG LPRSVLVVPT SDDERVNGVI 
ELGFLRPLTD RDVALLELIA GNIGTSIEAA RYRQRLQEVL AETQQLNEEL QVQQEELKTA 
NEELEEQSRI LKESQAHLET QQVELEQTNE QLAEQAQTLA EQRDAMDQKN TELNQAQVQL 
EERAEELQRS SKYKSEFLAN MSHELRTPLN SSLILAKLLA ENPQENLSAE QVKFAESIYS 
AGNDLLNLIN DILDISKVEA GKLEVMPENT SVARLADGLR GMFEPLAAVK QLAFSVQLQP 
DAPSTLFTDR QRLEQVIKNL LSNAVKFTEH GTVSLTIAGQ PDDRIAFIVR DSGIGIAADQ 
QESIFEAFRQ ADGTTNRKYG GTGLGLSISR DLATLLGGSI SVSSAPGQGS VFTLVLPQHY 
REPGDAPVAP LTFSPPAAAP VMASAVAVSP LASVEIPRFN DDRDKAPFNT RCILVVEDEP 
NFAHILYDLA HELGYQCLVA HGADEGYDLA KEFVPDAILL DMRLPDHSGL TVLQRLKEHA 
GTRHIPVHVI SVEDRVEAAM HMGAIGYAVK PTTREELKDV FARLEAKLTQ KVKRVLLVED 
DDLQRESIAR LIGDDDIEIT AVGLAQDALE LLRTTIFDCM VIDLKLPDML GNDLLKRMST 
EDICSFPPVI VYTGRNLTRD EEADLRKYSR SIIIKGARSP ERLLDEVTLF LHKVESQLSH 
ERQKMLKTAR SRDKVFEGRK VLLVDDDVRN IFALTSALET KGAVVVIGRN GREAIEKLNE 
VEDIDLVLMD VMMPEMDGFE ATMEIRKDPR WRKLPIIAVT AKAMKDDQER CLQAGANDYL 
AKPIDLDRLF SLIRVWLPKM ERI