Gene Pfl01_2642 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2642 
Symbol 
ID3714283 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3024321 
End bp3025160 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content53% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_348373 
Protein GI77458867 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACCA ATAACTGGAT GGGCGCAACG CCCGCCATTG ATACACTGAC AATCGCTGAA 
CTGACATTGC CCGGCACCCA CAACGCAGGC AGTGACTGGC GCGCCGACTA CCCGCTCTCC
CCGTCTCGCC ATTGGCTGGT ATGTCAGCAC GATACCTTTT ACGCCCAACT GCACAATGGT
TCCAGAGCGC TGGATATTCG CCTGAGCTAT GAAGCCAGTG CGGAAGGTCC AAAAAAATTC
ATTCTTCACC ATAATGGTTT TCGAAACTCT CGGACATTAG GGCAACTGAT CAACGACGTA
GAACTTTTTC TGCAAAAAAA CCCTGACGAG TTCATTGTTC TTGATTTCCA CAAACTTGAT
GGCAAAGACT TCGACCACGA CTACTTCAAT AAAATAATGA GCAGTTTTCT CGGGCATCGA
CTGATCCCGC GCTGGAACGC GGCCCTGAGC CTGCGGGAGC TGAAGCGCGC CAGCCCGCAA
CAGCGAGTGT TCGCTGCCGG TCCAGGCATA GAACTTGATC ACACGATATT CCACGATTAT
GTAAGCCATA AGTGGTCAGG CACCGATACG ACTACGCCTG ACGAGCTGAA GGCGTTCATC
GGTAGTGTCA TGCAGAATCC ACCGGGTACC TGGCGCCCCT GGTCGTTGTC CGCCACCAGC
TATACCTACC TGGGCGGTCC CGTCGACATC CATGACCAGT TGAACGAATG GTTCGATCTG
GACAACAGTG ACTGGGCATT GAAGTGCAAC ATCATCAATG TCGACTTCAT CGAAGAGTCG
GACCTGGTAG AGATTTGCCG GATTGCCAAC TTGATGAAAG CCCGAGAACG GGCGCTCTGA
 
Protein sequence
MSTNNWMGAT PAIDTLTIAE LTLPGTHNAG SDWRADYPLS PSRHWLVCQH DTFYAQLHNG 
SRALDIRLSY EASAEGPKKF ILHHNGFRNS RTLGQLINDV ELFLQKNPDE FIVLDFHKLD
GKDFDHDYFN KIMSSFLGHR LIPRWNAALS LRELKRASPQ QRVFAAGPGI ELDHTIFHDY
VSHKWSGTDT TTPDELKAFI GSVMQNPPGT WRPWSLSATS YTYLGGPVDI HDQLNEWFDL
DNSDWALKCN IINVDFIEES DLVEICRIAN LMKARERAL