Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_2632 |
Symbol | |
ID | 3714273 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 3012598 |
End bp | 3013899 |
Gene Length | 1302 bp |
Protein Length | 433 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | |
Product | outer membrane porin |
Protein accession | YP_348363 |
Protein GI | 77458857 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTCCCC CATTTCCCCT CATCACCCCG CGCCAGTCGC TTGGCTTCGG AGCCTTTGTG CTGTGCGCCG GTTTTACCGC ACAGGTCCAG GCCAGCGGTT TTTTCGAAGA CACCACGGCG AAGATCGAGT CGCGCACGGT GTACTTCAAC CGCGATTTCC GTGACGGGCA CACCTCCAGT GATCAGGGCG CGTCCAAGCG CGAAGAGTCG GCGCAGGGTT TCATTCTCAA TCTGCAATCG GGCTACACCG AAGGCACCGT CGGTTTCGGG ATCGATGCGC TGGGCATGGC GGGATTCCAG CTCGATTCCA GCCCGGATCG CAGCAACAGC GGCTTGTTGC CGTCCAGCGG CGACAACCCG CGCGGCTCGA AAGGTCAGTA CGCGAAAATG GGCCTGACCG CCAAGGTCAA AGTCTCGGAC ACGGTGCTGA AATACGGCGC ACTGCTGCCG GATCTGCCGT TGCTCAAGTA CAACGACGGT CGCCTGCTGC CGACCATGTT CAACGGTGCG ATGCTGACCT CCAAAGAGGT GAAGGACCTG ACCTTCATGG CCGCGCGTCT GGACAAGTAC ACCGCCCGGG ACTCGAGCGA TTCGCAAGAC ATCCGCGTGC ACTGCAAGAA CAAGCGCTAT GCCTGCAACA CCACCGCCGA TCATTTCGAC ATGTACGGCT TCGACTACAA GATCAACGAT CGCCTGACCG CGCAGTACCA CTACGCCGAG CTGGAAGACA TCTATCGCCA GCATTTCGTG GGGCTGTTGG CCAATCAGCC GCTGGGTGAC GGCGTGTTGA AAGCCGATCT GCGTTTGCTG AAAAGCGCCG ACAGCGGCGA TGCCAAAGCG GGCTCCATCG ACAACCGCGC CTTGAGCGGC ATGCTGTCAT ACGGCATCAG CGGTCACACC TTCAGCGCAG GCTGGCAGCG CATGAACGGC GACAATTCGA TGCCGTATCT GGATGGCAGC AACCCGTATC TGGTGAACTA CGTGCAGGTC AACGACTTCG CCGCCGCGCA GGAACGTTCC TGGCAGTTGC GTTACGACTA TGACTTCAAG GCGATCGGCA TCAACGGCCT GAGCTTCCTG ACCCGTTACG TGAACGGTGA TCACATCAAA GTTCCGGGCA GCGATCAGGA AGGCAAAGAG TGGGAACGCG ACAGCGAGTT GAAGTACGTG ATTCAGAGCG GCACGTTCAA GGACGTCAGC CTGCGTTTGC GTAATGCGAC GTACCGGACG AACTACGAGA AGTTTGCCCG GGACGTGGAT GAGACCCGGT TGATTGTGAG TTACAACTTT TCGGTGTTGT AA
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Protein sequence | MRPPFPLITP RQSLGFGAFV LCAGFTAQVQ ASGFFEDTTA KIESRTVYFN RDFRDGHTSS DQGASKREES AQGFILNLQS GYTEGTVGFG IDALGMAGFQ LDSSPDRSNS GLLPSSGDNP RGSKGQYAKM GLTAKVKVSD TVLKYGALLP DLPLLKYNDG RLLPTMFNGA MLTSKEVKDL TFMAARLDKY TARDSSDSQD IRVHCKNKRY ACNTTADHFD MYGFDYKIND RLTAQYHYAE LEDIYRQHFV GLLANQPLGD GVLKADLRLL KSADSGDAKA GSIDNRALSG MLSYGISGHT FSAGWQRMNG DNSMPYLDGS NPYLVNYVQV NDFAAAQERS WQLRYDYDFK AIGINGLSFL TRYVNGDHIK VPGSDQEGKE WERDSELKYV IQSGTFKDVS LRLRNATYRT NYEKFARDVD ETRLIVSYNF SVL
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