Gene Pfl01_2595 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2595 
Symbol 
ID3714196 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp2974030 
End bp2974710 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content55% 
IMG OID 
Productpeptidase C39, bacteriocin processing 
Protein accessionYP_348326 
Protein GI77458820 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.369961 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTAAGA CTGCCCTTCT CGCTCTGCTT TGCTTCTGTG GCCTGATCCA GGCTGCCCAG 
ATGCCCGTTG CTGCCTTGCC GGGCGGCACG CTTGTCTACA AGAACGTGCA AAGCATCCGT
GAGCGCAAGT TTGCCGACAT CGTCGAACAG AAAACCGACT TCAGCTGCGG CGCCGCCGCA
CTGGCGACGG TATTGCGCCA GGCCTATTGG CTCGACGTCG ATGAAGAGCA CATCATCAAA
GGCATGCTGG TCAACGCTGA CCAGGACCTT GTCCGTACTC AAGGTTTCTC CATGCTGGAC
ATGAAGCGCT ACATAGAAAG CATCGGCATG CGCGCCAGGG GCTACAAGAT TCCCCGAGAA
AAACTCGACG CAGTCACGAT CCCGGTGGTG GTACTGATGG AAATTCGCGG CTACAAGCAT
TTCGTGGTGA TGCAGCGGGC GGACAAGGAT TGGGTTTACA TCGGAGACCC GGTTTTAGGA
CACAAACGCT ACTCCCATGA TGACTTTGTC AAAGGTTGGA ACGGCATTGT CTTTGCCATC
GTCGGCCCCG GATACGACAA GACCAATGCA TTACGCAGTC CTCCGACACC GCTGACGGCC
AAAAACAAGC TGGATGGATT CAACCCGGTC AAAGATGCTG AATTGATGGA CTTCGGGTTC
ATACAGAGCG ACTTCTTTTA A
 
Protein sequence
MRKTALLALL CFCGLIQAAQ MPVAALPGGT LVYKNVQSIR ERKFADIVEQ KTDFSCGAAA 
LATVLRQAYW LDVDEEHIIK GMLVNADQDL VRTQGFSMLD MKRYIESIGM RARGYKIPRE
KLDAVTIPVV VLMEIRGYKH FVVMQRADKD WVYIGDPVLG HKRYSHDDFV KGWNGIVFAI
VGPGYDKTNA LRSPPTPLTA KNKLDGFNPV KDAELMDFGF IQSDFF