Gene Pfl01_2593 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2593 
Symbol 
ID3714194 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp2971890 
End bp2973194 
Gene Length1305 bp 
Protein Length434 aa 
Translation table11 
GC content59% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_348324 
Protein GI77458818 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.634912 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATCGAT CAGTATCACT GCGTGCCGCT GTATGTTTGA GTACTCTTCT ACCCGCGGCG 
ATGCTGCAAG CTGCACCCGA CGCCGATGTA GAAGCCCTGA AACAGGAACT TCTGGAGCTT
AAGCAACGAT ACGAAGTACA ACAGAAAGCC CTGGCGGTGC TCGAACAACG GGTCCGCCAG
GTCGAAGAGC AACCCGCCTC CCCGCCCCCA AAACGCCTGG CCAAATCGCC TTCGGACATG
AAAGGCAACC GGGTGGCTGC AGGGACCGGG GCTGCAGCAG CGTCGGGGGG CGCCGCCGGG
GGCAGCGGTG CATCCTATGG CCAGTCGCTG GCCGACGATT CGCAACCGGC ACAGAGCGTG
TCCAACCTGT ATGACGAAGC CAGCGGCTTC TTTGGCGGCG GCAAGTTCAG CTTTGAAACC
GGCGTGACCT ATTCGCGCTA CGACACCCGC CAACTGATCC TCAACGGTTT CCTCGCCCTG
GACTCGATTT TTCTGGGCAA CATCAACCTC GACCGGATCA AGGCCGATAC CTGGACGCTG
GACCTGACGG GCCGCTATAA CTTCGACAAC CGCTGGCAAT TCGACCTGAA CGTGCCGGTC
GTGTATCGCG AATCGACCTA TCAGTCCGGC GGCGGCAACG GCGGTGCATC CAACGTCACC
ACCGAACAGG ACGTCAGCCG CGACCCGACT CTCGGCGACG TCAACTTCGG CATTGCGTAT
AAGTTCCTGG ACGAGTCGGT CAACACTCCG GATGCCGTGG TTTCCTTGCG GGTCAAGGCG
CCAACCGGCA AGGACCCGTT CGGGATCAAG CTGCGCCAGA CCGATGCCAA CTCGAACCTG
TTCGTGCCTG ACACCTTGCC TACCGGCAAC GGCGTATGGT CGATCACCCC GGGCATCTCG
CTGGTCAAGA CGTTTGACCC TGCCGTGTTG TTCGGCAGTT TGTCCTACAC CCATAACTTC
GAGGAGTCGT TCGACGACAT CAGTTCGACC GTCAACCAGA AAAACCCGGG CAAGGTTCGC
ATCGGCGACA GCTTCCAGAT TGGTGCGGGC GTTGCCTTCG CACTGAACGA GAAGATGAGT
ATGTCGTTCT CAGTGTCTGA CCTGGTACAA CGCAAGAGCA AGCTGAAACA GGATGGCGGG
GATTGGGAAT CGGTGGTGTC CAGCGACGCC AACGCCGGTT ACTTCAACGT CGGCATGACC
ATCGCGGCCA CCGACAACCT GACCATTGTG CCCAACCTGT CCATCGGCAT GACGGACGAT
GCCCCGGACT TCTCCTTCAG CCTGAAATTC CCGTATTACT TCTAA
 
Protein sequence
MYRSVSLRAA VCLSTLLPAA MLQAAPDADV EALKQELLEL KQRYEVQQKA LAVLEQRVRQ 
VEEQPASPPP KRLAKSPSDM KGNRVAAGTG AAAASGGAAG GSGASYGQSL ADDSQPAQSV
SNLYDEASGF FGGGKFSFET GVTYSRYDTR QLILNGFLAL DSIFLGNINL DRIKADTWTL
DLTGRYNFDN RWQFDLNVPV VYRESTYQSG GGNGGASNVT TEQDVSRDPT LGDVNFGIAY
KFLDESVNTP DAVVSLRVKA PTGKDPFGIK LRQTDANSNL FVPDTLPTGN GVWSITPGIS
LVKTFDPAVL FGSLSYTHNF EESFDDISST VNQKNPGKVR IGDSFQIGAG VAFALNEKMS
MSFSVSDLVQ RKSKLKQDGG DWESVVSSDA NAGYFNVGMT IAATDNLTIV PNLSIGMTDD
APDFSFSLKF PYYF