| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_2589 |
|---|
| Symbol | nhaB |
|---|
| ID | 3714190 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | - |
|---|
| Start bp | 2966720 |
|---|
| End bp | 2968222 |
|---|
| Gene Length | 1503 bp |
|---|
| Protein Length | 500 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | |
|---|
| Product | sodium/proton antiporter |
|---|
| Protein accession | YP_348320 |
|---|
| Protein GI | 77458814 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.213827 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGGTT CGATGGCCCA AGCGTTCGCG CACAACTTTC TCGGGCATTC GCCCCGCTGG
TACAAGGCGT GCATCGTCGG GTTTCTGATG CTCAACGCGC TGGTGCTGTG GAGCGTCGGT
CCGGTCGCCG CTGGCTGGTT GCTGGTGATT GAGTTCATTT TCACCCTGGC CATGGCGCTC
AAGTGCTACC CCCTGATGCC CGGCGGTTTG CTGCTGATCG AAGCGCTGCT GCTGAAAATG
ACCACGCCCC AGGCGCTGTA TGAAGAGCTG CAGCACAATT TCCCGGTGAT TCTGCTGCTG
ATGTTCATGG TCGCCGGCAT CTACTTCATG AAAGACCTGC TGCTGTTCCT GTTCTCGCGC
CTGTTGCTGG GCGTGCGTTC GAAGGCGCTG CTGGCCCTGA TGTTCTGCTT TCTGTCGGCA
TTTCTTTCGG CGTTTCTCGA CGCACTGACC GTCACCGCAG TGATCATCAG CGCCGCCGTG
GGCTTCTATT CGGTTTATCA CCGGGTGGCC TCCGGCAACG ATCCACGCCA GGACAGCGAA
TTCAGCGATG ACCAGCATCT GCCTCAACTG CATCACGAGG ACTTGGAGCA GTTTCGCGCC
TTCCTGCGCA GCCTGTTGAT GCACGGCGCT GTCGGCACTG CATTGGGTGG CGTCTGCACC
CTGGTGGGTG AGCCACAAAA CCTGCTGATT GGTCACGAGA TGGGCTGGCA CTTCGCCGAG
TTTTTCCTGA AGGTCGCGCC GGTGTCGCTG CCGGTTCTGG TTGCGGGACT GGTGACCTGC
CTGCTGCTGG AGAAATTGCG CTGGTTCGGT TACGGCACGC TGCTGCCGGA CAACGTACGT
GCCGTGCTGG CCAACTACGC CGCCGAAGAC AACGCGGAGC GCACCCCGCG CCAACGCGCC
GCCCTGCTGG TGCAAGGCTG CGCTGCGCTG ATCCTGATCG CCGGGCTGGC GTTCCATATC
GCGGAAGTCG GCTTGATCGG ACTGATGGTG ATTGTGTTGA TCACTGCGTT CACCGGGATC
ACCGACGAGC ACCGACTGGG CAGCGCATTC AAGGACGCGA TGCCGTTCAC CGCGTTGCTG
GTGGTGTTCT TCGCCGTGGT CGCGGTGATT CACGACCAGC AACTGTTCGC GCCGCTGATT
CAGTGGGTGC TGGCACTGCC GGCCGACCAG CAACCGGGGA TGCTGTTCAT CGCTAACGGC
CTGCTGTCGG CGATCAGTGA CAACGTGTTC GTTGCCACGA TCTATATCAC TGAAGTAAAA
CAGGCTTTCC TGTCCGGACA CATGAGCCGC GAGCACTTCG AGACGCTGGC AATTGCGATC
AACACCGGCA CCAATCTGCC GAGCGTGGCG ACGCCCAATG GTCAGGCGGC GTTTCTGTTT
CTGCTGACGT CGGCGATTGC ACCGCTGGTA CGGTTGTCGT ACGGGCGGAT GGTGTGGATG
GCGTTGCCTT ACACCGTGGT GATGGGATTG CTCGGCTGGT ACGCCGTGAG CTACTGGCTG
TAG
|
|---|
| Protein sequence | MSGSMAQAFA HNFLGHSPRW YKACIVGFLM LNALVLWSVG PVAAGWLLVI EFIFTLAMAL
KCYPLMPGGL LLIEALLLKM TTPQALYEEL QHNFPVILLL MFMVAGIYFM KDLLLFLFSR
LLLGVRSKAL LALMFCFLSA FLSAFLDALT VTAVIISAAV GFYSVYHRVA SGNDPRQDSE
FSDDQHLPQL HHEDLEQFRA FLRSLLMHGA VGTALGGVCT LVGEPQNLLI GHEMGWHFAE
FFLKVAPVSL PVLVAGLVTC LLLEKLRWFG YGTLLPDNVR AVLANYAAED NAERTPRQRA
ALLVQGCAAL ILIAGLAFHI AEVGLIGLMV IVLITAFTGI TDEHRLGSAF KDAMPFTALL
VVFFAVVAVI HDQQLFAPLI QWVLALPADQ QPGMLFIANG LLSAISDNVF VATIYITEVK
QAFLSGHMSR EHFETLAIAI NTGTNLPSVA TPNGQAAFLF LLTSAIAPLV RLSYGRMVWM
ALPYTVVMGL LGWYAVSYWL
|
|---|
| |