Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_2584 |
Symbol | |
ID | 3714185 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 2960951 |
End bp | 2962702 |
Gene Length | 1752 bp |
Protein Length | 583 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_348315 |
Protein GI | 77458809 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.734058 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCGGTGT TCAAACGCAG CAAAACGACT GCGACAGGTT TCGACTGGGC CGGTTTCATC TGGCTGTTCG TGTTCTTCTG GTACTTCTCC GGTATCACCC AACTGCTGAT CCAGTTGACA GGCACCTCAG GGTTTACCGG GTTCCGCCAG GCTTTCGTGA TGAGCGCTGT GTGGCTCGCG CCGATGCTGC TGTTCCCCAA ACGCACCCGA GTGCTCGCCG CGCTGATCGG CGTGGTGCTG TGGGCCTGCT CGATGGCCAG CCTGGGTTAC TTCTTCATCT ACCAGCAGGA ATTTTCCCAG AGCGTGATTT TCATCATGTT CGAGTCGAAC GTGTCCGAAG CCGGCGAGTA CATGACCCAG TACTTTGCCT GGTGGATGGT CCCGGCGTTC CTCGCGCACA CCGCATTCGC GTATTTCCTG TGGACCCGCC TGCGTCCGGT CTACCTGCCC CGTGGCCGGG CATTTGTTGC CGCCATGGCG ATTCTGGTGG CCGTGATCGG TTATCCGCTG GTCAAGCAGA CCATGCGTAC CGGCAGCTTC GCCCAAGGCT TCGAGAAATT CGAAACCCGC ATCGAGCCGG CCGTACCGTG GCAGATGGCC GTGGCTTATC ACCGCTATCA GGAAACCCTG GCCGACATGC AGGGCATGCT GCACAGCGCG AGCAAGATCC CACCGCTGAA AAACCTCAAG GACTCGGGCG CCAACCAGCC GGCGACTCTG GTGCTGGTCA TCGGCGAATC CACCAACCGC CAGCGCATGA GCCTCTACGG TTACCCGCGT AAAACCACGC CGGAACTGGA CAAGCTCAAG GATCAGCTGG CGGTCTTCGA CAACGTCATC ACCCCGCGCC CGTACACCAT CGAAGCGCTG CAACAGGTGC TGACCTTCGC CGACGAAGAG AACCCGGACC TGTACCTGTC CACGCCGTCG CTGGTCAGCA TGATGAAACA GGCCGGCTAC AAGACGTTCT GGATCACCAA CCAGCAGACC ATGACCAAGC GCAACACCAT GCTCACGACG TTCTCCGAAC AGGCCGACGA GCAGGTGTAC CTGAACAATA ACCGCAACCA GAACGCCGCG CAGTACGACG GCGACGTGAT CGAGCCGTTC AACAAGGCGC TGGCCGATGC GGCGCCGCGC AAGTTGATCG TCGTGCATCT GCTCGGTACA CACATGAGCT ACCAGTACCG TTATCCGCCG AGCTTCGACA AGTTCCAGGA TCGCAACGGC GTTCCGGCCG GTGTGCGTGA CGATCAGGTG CCGACCTACA ACAGCTACGA CAACGCGGTG CTGTACAACG ATTTCGTGGT CTCGAGCCTG ATCAAGGACT ACGCCAAATC CGATCCGAAC GGCTTCTTGT TGTACCTCTC CGACCACGGT GAAGACGTGT TCGACTCGGT GGGCCACGGC ACTCTGGGTC GCAACGAAAA CAAGCCGACG GCGCCGATGT ACACCATTCC GTTCATGGCC TGGGCCTCGC CAAAATGGCG GGAAACCCAT GACTGGAGCT TCGCCGGGGA TCTGAGCCGC CCTTACAGCA GCTCGCACCT GATCCACACC TGGGCGGATC TGGCCGGTTT GAGTTTCGAT GAACTGGATC GCAGCAAGAG CCTGGTCAGC GACAGCTTCA AGCCGCGTCC GCTGTTGATC GGCAATCCTT ACGAACGCGA ACAGCGGGCA CTGATCGACT TCAGCCTGAT GAAGCCAAAA AAACCGGCGG CAGCGACCAC GGAAGTGGTG TTGCAGCAGT GA
|
Protein sequence | MAVFKRSKTT ATGFDWAGFI WLFVFFWYFS GITQLLIQLT GTSGFTGFRQ AFVMSAVWLA PMLLFPKRTR VLAALIGVVL WACSMASLGY FFIYQQEFSQ SVIFIMFESN VSEAGEYMTQ YFAWWMVPAF LAHTAFAYFL WTRLRPVYLP RGRAFVAAMA ILVAVIGYPL VKQTMRTGSF AQGFEKFETR IEPAVPWQMA VAYHRYQETL ADMQGMLHSA SKIPPLKNLK DSGANQPATL VLVIGESTNR QRMSLYGYPR KTTPELDKLK DQLAVFDNVI TPRPYTIEAL QQVLTFADEE NPDLYLSTPS LVSMMKQAGY KTFWITNQQT MTKRNTMLTT FSEQADEQVY LNNNRNQNAA QYDGDVIEPF NKALADAAPR KLIVVHLLGT HMSYQYRYPP SFDKFQDRNG VPAGVRDDQV PTYNSYDNAV LYNDFVVSSL IKDYAKSDPN GFLLYLSDHG EDVFDSVGHG TLGRNENKPT APMYTIPFMA WASPKWRETH DWSFAGDLSR PYSSSHLIHT WADLAGLSFD ELDRSKSLVS DSFKPRPLLI GNPYEREQRA LIDFSLMKPK KPAAATTEVV LQQ
|
| |