Gene Pfl01_2584 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2584 
Symbol 
ID3714185 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp2960951 
End bp2962702 
Gene Length1752 bp 
Protein Length583 aa 
Translation table11 
GC content60% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_348315 
Protein GI77458809 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.734058 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGTGT TCAAACGCAG CAAAACGACT GCGACAGGTT TCGACTGGGC CGGTTTCATC 
TGGCTGTTCG TGTTCTTCTG GTACTTCTCC GGTATCACCC AACTGCTGAT CCAGTTGACA
GGCACCTCAG GGTTTACCGG GTTCCGCCAG GCTTTCGTGA TGAGCGCTGT GTGGCTCGCG
CCGATGCTGC TGTTCCCCAA ACGCACCCGA GTGCTCGCCG CGCTGATCGG CGTGGTGCTG
TGGGCCTGCT CGATGGCCAG CCTGGGTTAC TTCTTCATCT ACCAGCAGGA ATTTTCCCAG
AGCGTGATTT TCATCATGTT CGAGTCGAAC GTGTCCGAAG CCGGCGAGTA CATGACCCAG
TACTTTGCCT GGTGGATGGT CCCGGCGTTC CTCGCGCACA CCGCATTCGC GTATTTCCTG
TGGACCCGCC TGCGTCCGGT CTACCTGCCC CGTGGCCGGG CATTTGTTGC CGCCATGGCG
ATTCTGGTGG CCGTGATCGG TTATCCGCTG GTCAAGCAGA CCATGCGTAC CGGCAGCTTC
GCCCAAGGCT TCGAGAAATT CGAAACCCGC ATCGAGCCGG CCGTACCGTG GCAGATGGCC
GTGGCTTATC ACCGCTATCA GGAAACCCTG GCCGACATGC AGGGCATGCT GCACAGCGCG
AGCAAGATCC CACCGCTGAA AAACCTCAAG GACTCGGGCG CCAACCAGCC GGCGACTCTG
GTGCTGGTCA TCGGCGAATC CACCAACCGC CAGCGCATGA GCCTCTACGG TTACCCGCGT
AAAACCACGC CGGAACTGGA CAAGCTCAAG GATCAGCTGG CGGTCTTCGA CAACGTCATC
ACCCCGCGCC CGTACACCAT CGAAGCGCTG CAACAGGTGC TGACCTTCGC CGACGAAGAG
AACCCGGACC TGTACCTGTC CACGCCGTCG CTGGTCAGCA TGATGAAACA GGCCGGCTAC
AAGACGTTCT GGATCACCAA CCAGCAGACC ATGACCAAGC GCAACACCAT GCTCACGACG
TTCTCCGAAC AGGCCGACGA GCAGGTGTAC CTGAACAATA ACCGCAACCA GAACGCCGCG
CAGTACGACG GCGACGTGAT CGAGCCGTTC AACAAGGCGC TGGCCGATGC GGCGCCGCGC
AAGTTGATCG TCGTGCATCT GCTCGGTACA CACATGAGCT ACCAGTACCG TTATCCGCCG
AGCTTCGACA AGTTCCAGGA TCGCAACGGC GTTCCGGCCG GTGTGCGTGA CGATCAGGTG
CCGACCTACA ACAGCTACGA CAACGCGGTG CTGTACAACG ATTTCGTGGT CTCGAGCCTG
ATCAAGGACT ACGCCAAATC CGATCCGAAC GGCTTCTTGT TGTACCTCTC CGACCACGGT
GAAGACGTGT TCGACTCGGT GGGCCACGGC ACTCTGGGTC GCAACGAAAA CAAGCCGACG
GCGCCGATGT ACACCATTCC GTTCATGGCC TGGGCCTCGC CAAAATGGCG GGAAACCCAT
GACTGGAGCT TCGCCGGGGA TCTGAGCCGC CCTTACAGCA GCTCGCACCT GATCCACACC
TGGGCGGATC TGGCCGGTTT GAGTTTCGAT GAACTGGATC GCAGCAAGAG CCTGGTCAGC
GACAGCTTCA AGCCGCGTCC GCTGTTGATC GGCAATCCTT ACGAACGCGA ACAGCGGGCA
CTGATCGACT TCAGCCTGAT GAAGCCAAAA AAACCGGCGG CAGCGACCAC GGAAGTGGTG
TTGCAGCAGT GA
 
Protein sequence
MAVFKRSKTT ATGFDWAGFI WLFVFFWYFS GITQLLIQLT GTSGFTGFRQ AFVMSAVWLA 
PMLLFPKRTR VLAALIGVVL WACSMASLGY FFIYQQEFSQ SVIFIMFESN VSEAGEYMTQ
YFAWWMVPAF LAHTAFAYFL WTRLRPVYLP RGRAFVAAMA ILVAVIGYPL VKQTMRTGSF
AQGFEKFETR IEPAVPWQMA VAYHRYQETL ADMQGMLHSA SKIPPLKNLK DSGANQPATL
VLVIGESTNR QRMSLYGYPR KTTPELDKLK DQLAVFDNVI TPRPYTIEAL QQVLTFADEE
NPDLYLSTPS LVSMMKQAGY KTFWITNQQT MTKRNTMLTT FSEQADEQVY LNNNRNQNAA
QYDGDVIEPF NKALADAAPR KLIVVHLLGT HMSYQYRYPP SFDKFQDRNG VPAGVRDDQV
PTYNSYDNAV LYNDFVVSSL IKDYAKSDPN GFLLYLSDHG EDVFDSVGHG TLGRNENKPT
APMYTIPFMA WASPKWRETH DWSFAGDLSR PYSSSHLIHT WADLAGLSFD ELDRSKSLVS
DSFKPRPLLI GNPYEREQRA LIDFSLMKPK KPAAATTEVV LQQ