| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_2580 |
|---|
| Symbol | |
|---|
| ID | 3714181 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | + |
|---|
| Start bp | 2956907 |
|---|
| End bp | 2957488 |
|---|
| Gene Length | 582 bp |
|---|
| Protein Length | 193 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | |
|---|
| Product | DinB |
|---|
| Protein accession | YP_348311 |
|---|
| Protein GI | 77458805 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 0.747575 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.417137 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTCAGC CACTGTCCCA CCATTTGCTG ACCATGGCCT ATCAGAACGC CTGGGCCAAC
CATCGACTGG CCAAGGCCTG GAGTCAGCTC GACGACGCGC AGCTGGCAGC GCCACGGGTC
AGTTTCTTCC CGAGCATCCG CCTGACCCTC AACCACATCC TCACCTGCGA CTGGTTCTAC
GTCGACGCGC TGGAGCGCGA GTTGCGCGGT GACGAACCGC ATCCCGATTG CTATGTGTTC
TTCAACGCTG AGGAACCCTT CACCGAGGCG CAGGCCTTGC GCCGTGAACA GGCCCATGTC
GACCGTCGAC TGATCGCCTA CTGCGAGCAA CTGCGCGATG CCGATCTGGG GCGCATCGTC
ACCATCGCCC GCGACACCCC GCAGCACGAC AGTCGCCTGC GGATGATCTC GCACCTGTTC
GAACATCAGA TTCACCATCG TGGCCAGGTC CACGCCATGC TCAGCGGCAC CTCGGTGAAG
CCACCGCAAC TGGACGAGTT TTTCTGTGTC GGCGAGTCCG GTCTGCGAGC CGAGGATTTC
GCCGAACTGG GCTGGACCGA AGCGCTTGTC TGGGGGCACT GA
|
|---|
| Protein sequence | MTQPLSHHLL TMAYQNAWAN HRLAKAWSQL DDAQLAAPRV SFFPSIRLTL NHILTCDWFY
VDALERELRG DEPHPDCYVF FNAEEPFTEA QALRREQAHV DRRLIAYCEQ LRDADLGRIV
TIARDTPQHD SRLRMISHLF EHQIHHRGQV HAMLSGTSVK PPQLDEFFCV GESGLRAEDF
AELGWTEALV WGH
|
|---|
| |