Gene Pfl01_2576 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2576 
Symbol 
ID3714177 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp2953591 
End bp2954550 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content66% 
IMG OID 
Productagmatinase 
Protein accessionYP_348307 
Protein GI77458801 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGTGC CCATGCAAAA CGATCAGGCC CTGACCCGTG ACAGCCTTTT TGGCACCGCT 
GCTGAAAGCA CCTACGCCGG GATCACCAGT TTCATGCGCC GGCGCTACAG CCGCGACCTG
CGCGGCGCGG ACGTGGCGGT CAGCGGTGTG CCGTTCGACA CCGCCACCAG CAACCGTCCG
GGCGCCCGTT TCGGGCCGCG CGGGATTCGT GCGGCGTCCA CCGGGATTGC CTGGGAACGG
CACTGGCCAT GGGCGTTCGA CCCGTTCGAT CATCTGGCGG TGATCGACTA CGGCGATTGC
GACTTCGATT ACGGCTCGCC GCACACCATC CCGGACAGCA TCGAGGCCCA CGCCGAGCAT
ATTCTCAGCT CCGGCAGCGC CATGCTCACC TTTGGCGGCG ACCATTTCAT CAGCTATCCG
CTGCTCAAGG CCCATGCACG CAAGCACGGC ACGCTGTCGC TGATCCACTT CGATGCGCAC
AGCGATACCT GGCCGGACGA GGGTGGCAAG CGGGTCGATC ACGGCACCAT GTTCTGGCAC
GCGGCGCGGG AAGGGCTGGT GGATCCGGCG CGTTCGGTGC AGATCGGCTT GCGCACCACC
AATGACGATC ATCAGGGCTT TCAGGTGCTG GACGCGCGGC AGGTGCATCG GTGTGGATGC
GAGGCGATCA TCGAGGCGAT TCGCGCGCGG GTCGGGGATA ACCCGGTGTA CCTGACGTTC
GACATCGATT GCCTCGACCC GGCCTTCGCA CCGGGCACCG GGACCCCGGT GTGCGGCGGG
TTGAGCACGG TGCAGGCGCT GGAGATCCTT GGCGGCCTGC GCGGGATCAA TCTGGTGGGC
ATGGACGTGG TGGAAGTGGC CCCGGCTTAC GACCACGCGG ACGTGACGTC GCTGGCGGCG
GCAACCCTGG CCATGGAGAT GCTTTGCCTG TACGCGGCCC GGCACAAAGT CGACGCGTGA
 
Protein sequence
MDVPMQNDQA LTRDSLFGTA AESTYAGITS FMRRRYSRDL RGADVAVSGV PFDTATSNRP 
GARFGPRGIR AASTGIAWER HWPWAFDPFD HLAVIDYGDC DFDYGSPHTI PDSIEAHAEH
ILSSGSAMLT FGGDHFISYP LLKAHARKHG TLSLIHFDAH SDTWPDEGGK RVDHGTMFWH
AAREGLVDPA RSVQIGLRTT NDDHQGFQVL DARQVHRCGC EAIIEAIRAR VGDNPVYLTF
DIDCLDPAFA PGTGTPVCGG LSTVQALEIL GGLRGINLVG MDVVEVAPAY DHADVTSLAA
ATLAMEMLCL YAARHKVDA