Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_2529 |
Symbol | |
ID | 3712102 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 2891416 |
End bp | 2892879 |
Gene Length | 1464 bp |
Protein Length | 487 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | |
Product | GntR family transcriptional regulator |
Protein accession | YP_348260 |
Protein GI | 77458754 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.796458 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGGGGGC TTTTCCCTGA CACTCTACAC ATTCAACCAG CACCAAGGCC CCCGATGAAA CGCTACGAAA AATTCGCCGA CGACATCGCT GAACTGATCC GCTCCGGCGT CCTCGGCCCC GGTCAACGGG TGCCGTCGGT GCGCTACGCA AGCCAGACCT ACGGCGTCAG CCCGTCCACG GTATTCCAGG CCTACTACCT GCTGGAACGT CGCGGCCTGA TCCGTGCCCG CCCGCGTTCC GGCTATTTCG TCAACACCCA CGCGCCGAGC CCGTTCTCGG AGCCGGTGAT CAGCAGTCAG GTCAACGAGT CCACCAAGGT CGACGTCAGC GAGCTGGTGT TCTCGGTACT CGAGTCGATC AAAGATCCGA GCACCGTGCC GTTCGGCTCG GCATTCCCCA GCCCGACCCT GTTCCCCCTG CAACGCCTGT CCCGCTCGCT GGCCAGCGCC GCACGGGAGA TGGACCCGCG CATGGTGGTC ACCGACATGT CGCCGGGCAA CCCGCAACTG CGTCGGCAGA TCGCCCTGCG CTACATGGTC GGCGGCCTGA TGCTGCCGAT GGAAGAACTG CTGATCACCA ACGGCGCCCT CGAAGCGCTC AACCTGTGCC TGCAAGCGGT GACCGAACCC GGCGATCTGG TGGCCATCGA AGCCCCGGCG TTTTACGCCA GCCTGCAAGT GCTCGAACGC CTGAAACTCA AAGCCGTGGA AATCCCCGTT CACCCGCGCG ACGGCATCGA CCTCGGCGTG CTCGCCCAGA CACTGGAACG ACACCCGATC AAGGCCTGCT GGTGCATGAC CAGTTTCCAG AACCCGATGG GCGCGACCAT GCCCGAGGCC AAGAAACAGG AACTGGTGGA ACTGCTGAAA CAGCACCAGG TGCCATTGAT CGAAGACGAC GTCTACGCCG AACTCTATTA CGGCCAGCAG GCGCCGAAAC CGGCCAAGGC CTTCGACACC GAAGGTCTGG TGATGCATTG CGGCTCGTTC GCCAAGAGTC TGGCCCCCGG CTATCGCATC GGCTGGGTCG CCGCCGGGCG CTACGCGCAA AAGATCGAAC GACTGAAACT GATGACCTCA CTCTGTGCCT CGATGCCGGC CCAAGCGGCC ATCGCCGACT ACCTGCAACA CGGTGGCTAC GACCGCCACC TGCGCAAATT GCGCTACGCC CTCGAAGAAC AGCAAAGCGC GATGCTCGCG GCCATCGCCC GTTACTTCCC GGCGCAGACG CGCGTGAGCC AACCGGCCGG CGGCTACTTC CTGTGGCTGG AACTGCCACC GCAGATGGAT TCGTTGAAGT TGTTTCAGAT GGCGCTGGCG CAGGGGATCA GCATCGCGCC GGGGCCGATT TTTTCGCCGA CCCAGCGCTT CAGAAATTGC ATCCGGTTGA ACTACGGCAG CCCGTGGACC GAGGATGCGG AAAAGGCCAT GGAGACGCTG GGGCGGATTG TGCGATCGTT CTGA
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Protein sequence | MRGLFPDTLH IQPAPRPPMK RYEKFADDIA ELIRSGVLGP GQRVPSVRYA SQTYGVSPST VFQAYYLLER RGLIRARPRS GYFVNTHAPS PFSEPVISSQ VNESTKVDVS ELVFSVLESI KDPSTVPFGS AFPSPTLFPL QRLSRSLASA AREMDPRMVV TDMSPGNPQL RRQIALRYMV GGLMLPMEEL LITNGALEAL NLCLQAVTEP GDLVAIEAPA FYASLQVLER LKLKAVEIPV HPRDGIDLGV LAQTLERHPI KACWCMTSFQ NPMGATMPEA KKQELVELLK QHQVPLIEDD VYAELYYGQQ APKPAKAFDT EGLVMHCGSF AKSLAPGYRI GWVAAGRYAQ KIERLKLMTS LCASMPAQAA IADYLQHGGY DRHLRKLRYA LEEQQSAMLA AIARYFPAQT RVSQPAGGYF LWLELPPQMD SLKLFQMALA QGISIAPGPI FSPTQRFRNC IRLNYGSPWT EDAEKAMETL GRIVRSF
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