Gene Pfl01_2518 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2518 
Symbol 
ID3712091 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp2874875 
End bp2876521 
Gene Length1647 bp 
Protein Length548 aa 
Translation table11 
GC content63% 
IMG OID 
Productheat shock protein DnaJ-like 
Protein accessionYP_348249 
Protein GI77458743 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.142302 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.210715 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTGCT GGACCGTCCT TGGCCTGTCG GCCGACGCCG ATGTGCGCGC TATCAAACGC 
CAATATGCCG TCCTGCTCAA ACAAACCCGC CCCGACGATG ACCCCGAGGG CTTCCAGCGG
CTGCGCGATG CCTATGAGCA GGCGCTGGCG TACAAGGAAT GGCAGCAGTA TCACGAGCAG
GATGAAGAAC AAGCGCAGGA TCCGGGCATT GAAGAATCCT GGGATCTGAG TGGCCTGACA
GTGGTTGAGG TCGATGCCCT GCAACTGGCG ACCCGCTCGC TGGACGGGCT CAGCGTTGAA
GAGCTGAATC ATCGCCATGC CGTCACCCTC AAACAGGGTT GCGCGCATTT CTTCGAAGAC
ACGGTGCTGC ATCATTGCAT TGAACACCCT GAGACTTCGC AGACGCTGGT GGACTGGGCC
ATACCGACCT TCTTCTGGTT CAGCGCCTGG CAACGCCTGG AGCTGGACGA GATATCGATT
GACCTGTTGC TGGATCAGCA ACGCGCGCGC ATTGCGCAAC CGATGCGCGA TGCCCTCGAA
CGGGAAGACG TCGACGGATT TTTCCAGGCC TACGCCCGTT GTGCCGATTT CAATTGGCTG
ACGATTGAAC AACATCGGCA ATGGTTCAAC CGTGCCCTGA GCCATTTGCT GCTGGATGCG
CCAGTCTGGT CTCCCGAGAT TTTCGAACGG GTGCGCACTG GTCAAGGCTG GCACGGCAGC
ACGGGGAATC TCTGCCCTGA CGGCGAATGG CAACGCCTGC TGGCTCGACA AAATGCGCCG
CTTTTCCTGG CTCACCAGCA ACAACTGGCT ACGGAGCCCG CCGTCACCTC CGAACACCGC
GCCGCCCGCC TGCTGCTCGG CACCGGCTCG TTCAGCGCCC GCCGCGCGCT GGCCCGGCGC
CTGCGCGAGG ACGACTGGGC TCAATGCCGC AAGTTGAGTT CGGAGCTGTA CGCCAATCAC
CCCAAGATCT GCGCGCAGAT GCCCGGCGGC ACAGCGTTTT TCTGGCGCGA CTGGGAACTG
AGCTTCAATG ACTGGCCGAC CTACGTGGGC GTGGTGCTGG CCTGCCTGAT CGGTGCATTC
ACCCATTACA TTCCGCTGGG CATTCGCCTC AGCGGGCTGA TCAATATCGT CATGATCTCG
ACCGTGGTGT TCGGCGTGAT TGTGGCCGGG CTCAATTGGC TGGTGCACAA CGTTGCCCAT
CGTGTATGGC GGCTGGATGA CCGGCTCAGC ACTGGCCTCT GCCCGCGCTT CCTCAAAGAC
TCGCCGCCAT TCGGCGTGCT GCGCGACTTC CTGCCCGGCG CGCTGATGGT GGCCGGGCTC
GGCTGGTTTT TCGGCCCGAT TGCCGGCGTG GTGTACGCCG CGACACTGGC GACCTTCGGA
CTGGTGCGGC GCTGGCAGTC CAGGCCCCGG GTGTCCTGGG AAGAGAGCCG TCCGGCCATG
AAGGTCGGCG TGACGATCCT CGGAATTCTG GTGCTGGCCC TCGTGCTCGG CGTATTCAAA
GTGGTCGCCA GCCAAGGCAC GGTCAATCGC AATCAGGGCC TGCAACCCTG GACCGAACGC
CTGTGCAGTC GCTTGCCGGC CACCACCGCC GAATGCAGCG CACCGGCCAC CGTCGAACAG
TGGTACGGCA AGGAGGCCCG CCCATGA
 
Protein sequence
MSCWTVLGLS ADADVRAIKR QYAVLLKQTR PDDDPEGFQR LRDAYEQALA YKEWQQYHEQ 
DEEQAQDPGI EESWDLSGLT VVEVDALQLA TRSLDGLSVE ELNHRHAVTL KQGCAHFFED
TVLHHCIEHP ETSQTLVDWA IPTFFWFSAW QRLELDEISI DLLLDQQRAR IAQPMRDALE
REDVDGFFQA YARCADFNWL TIEQHRQWFN RALSHLLLDA PVWSPEIFER VRTGQGWHGS
TGNLCPDGEW QRLLARQNAP LFLAHQQQLA TEPAVTSEHR AARLLLGTGS FSARRALARR
LREDDWAQCR KLSSELYANH PKICAQMPGG TAFFWRDWEL SFNDWPTYVG VVLACLIGAF
THYIPLGIRL SGLINIVMIS TVVFGVIVAG LNWLVHNVAH RVWRLDDRLS TGLCPRFLKD
SPPFGVLRDF LPGALMVAGL GWFFGPIAGV VYAATLATFG LVRRWQSRPR VSWEESRPAM
KVGVTILGIL VLALVLGVFK VVASQGTVNR NQGLQPWTER LCSRLPATTA ECSAPATVEQ
WYGKEARP