Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_2518 |
Symbol | |
ID | 3712091 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 2874875 |
End bp | 2876521 |
Gene Length | 1647 bp |
Protein Length | 548 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | |
Product | heat shock protein DnaJ-like |
Protein accession | YP_348249 |
Protein GI | 77458743 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.142302 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.210715 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTTGCT GGACCGTCCT TGGCCTGTCG GCCGACGCCG ATGTGCGCGC TATCAAACGC CAATATGCCG TCCTGCTCAA ACAAACCCGC CCCGACGATG ACCCCGAGGG CTTCCAGCGG CTGCGCGATG CCTATGAGCA GGCGCTGGCG TACAAGGAAT GGCAGCAGTA TCACGAGCAG GATGAAGAAC AAGCGCAGGA TCCGGGCATT GAAGAATCCT GGGATCTGAG TGGCCTGACA GTGGTTGAGG TCGATGCCCT GCAACTGGCG ACCCGCTCGC TGGACGGGCT CAGCGTTGAA GAGCTGAATC ATCGCCATGC CGTCACCCTC AAACAGGGTT GCGCGCATTT CTTCGAAGAC ACGGTGCTGC ATCATTGCAT TGAACACCCT GAGACTTCGC AGACGCTGGT GGACTGGGCC ATACCGACCT TCTTCTGGTT CAGCGCCTGG CAACGCCTGG AGCTGGACGA GATATCGATT GACCTGTTGC TGGATCAGCA ACGCGCGCGC ATTGCGCAAC CGATGCGCGA TGCCCTCGAA CGGGAAGACG TCGACGGATT TTTCCAGGCC TACGCCCGTT GTGCCGATTT CAATTGGCTG ACGATTGAAC AACATCGGCA ATGGTTCAAC CGTGCCCTGA GCCATTTGCT GCTGGATGCG CCAGTCTGGT CTCCCGAGAT TTTCGAACGG GTGCGCACTG GTCAAGGCTG GCACGGCAGC ACGGGGAATC TCTGCCCTGA CGGCGAATGG CAACGCCTGC TGGCTCGACA AAATGCGCCG CTTTTCCTGG CTCACCAGCA ACAACTGGCT ACGGAGCCCG CCGTCACCTC CGAACACCGC GCCGCCCGCC TGCTGCTCGG CACCGGCTCG TTCAGCGCCC GCCGCGCGCT GGCCCGGCGC CTGCGCGAGG ACGACTGGGC TCAATGCCGC AAGTTGAGTT CGGAGCTGTA CGCCAATCAC CCCAAGATCT GCGCGCAGAT GCCCGGCGGC ACAGCGTTTT TCTGGCGCGA CTGGGAACTG AGCTTCAATG ACTGGCCGAC CTACGTGGGC GTGGTGCTGG CCTGCCTGAT CGGTGCATTC ACCCATTACA TTCCGCTGGG CATTCGCCTC AGCGGGCTGA TCAATATCGT CATGATCTCG ACCGTGGTGT TCGGCGTGAT TGTGGCCGGG CTCAATTGGC TGGTGCACAA CGTTGCCCAT CGTGTATGGC GGCTGGATGA CCGGCTCAGC ACTGGCCTCT GCCCGCGCTT CCTCAAAGAC TCGCCGCCAT TCGGCGTGCT GCGCGACTTC CTGCCCGGCG CGCTGATGGT GGCCGGGCTC GGCTGGTTTT TCGGCCCGAT TGCCGGCGTG GTGTACGCCG CGACACTGGC GACCTTCGGA CTGGTGCGGC GCTGGCAGTC CAGGCCCCGG GTGTCCTGGG AAGAGAGCCG TCCGGCCATG AAGGTCGGCG TGACGATCCT CGGAATTCTG GTGCTGGCCC TCGTGCTCGG CGTATTCAAA GTGGTCGCCA GCCAAGGCAC GGTCAATCGC AATCAGGGCC TGCAACCCTG GACCGAACGC CTGTGCAGTC GCTTGCCGGC CACCACCGCC GAATGCAGCG CACCGGCCAC CGTCGAACAG TGGTACGGCA AGGAGGCCCG CCCATGA
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Protein sequence | MSCWTVLGLS ADADVRAIKR QYAVLLKQTR PDDDPEGFQR LRDAYEQALA YKEWQQYHEQ DEEQAQDPGI EESWDLSGLT VVEVDALQLA TRSLDGLSVE ELNHRHAVTL KQGCAHFFED TVLHHCIEHP ETSQTLVDWA IPTFFWFSAW QRLELDEISI DLLLDQQRAR IAQPMRDALE REDVDGFFQA YARCADFNWL TIEQHRQWFN RALSHLLLDA PVWSPEIFER VRTGQGWHGS TGNLCPDGEW QRLLARQNAP LFLAHQQQLA TEPAVTSEHR AARLLLGTGS FSARRALARR LREDDWAQCR KLSSELYANH PKICAQMPGG TAFFWRDWEL SFNDWPTYVG VVLACLIGAF THYIPLGIRL SGLINIVMIS TVVFGVIVAG LNWLVHNVAH RVWRLDDRLS TGLCPRFLKD SPPFGVLRDF LPGALMVAGL GWFFGPIAGV VYAATLATFG LVRRWQSRPR VSWEESRPAM KVGVTILGIL VLALVLGVFK VVASQGTVNR NQGLQPWTER LCSRLPATTA ECSAPATVEQ WYGKEARP
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