Gene Pfl01_2516 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2516 
Symbol 
ID3712206 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp2873165 
End bp2873836 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content60% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_348247 
Protein GI77458741 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.518035 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.553883 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCTAG CCGTAATGAT GAGCACCCTG TGCATTGCCA CGCTGGGCGT GGTGGGTTGC 
TCCAGCAAAA CCGTCGCACC CGACGAGTAC TCAGGCTTCC TCAAGGACTA CAGCCAACTC
AGGGAGGCCA AATCCCCGTC GGGGGCCGAA GTGATGCGCT GGATCGACCC GAAAGTCGAC
ATCGGCAAAT TCACCAGCTT TTACGTCGAA CCGACCCAGC TCTATCCCAA ACCGCAACCC
ACCGTGAAGA TTCCACAGCA GACCCTCAAC GGCATCACCA GCTACTACGA TCAGGCGCTC
AAGCGTGAAC TGGGCAAATC CCTGCCGCTG GCCTCAGGCC CCGGGCCGGG CGTGATTGTG
GTGCGCGCGG CCATCACTGC CGTCAGCAGC AAGACCGAAG GCCTGCATGC TTATGAGGTG
ATTCCGGTGG CGTTGGTGGC GGCAGCGGTC AGCACCGCCA GCGGTATTCG CGATCAGGAA
ACCACGCTGG CGACCGAAGC GGTGTTCCTC GATGGCGGCA CCAACAAGGT GGCGGCGCAG
GTGGTGCGCA AGGGCACTGG CAAACCGCTG GAAAATGATT CGCAGGTGAT GAAGGCCGAT
GACGTGAAAA GCGTGATCGA TGGCTGGGCC TCGGATCTGC ATCAGTCCTA CCTCAAGCTC
AAGGCCAAGT AA
 
Protein sequence
MKLAVMMSTL CIATLGVVGC SSKTVAPDEY SGFLKDYSQL REAKSPSGAE VMRWIDPKVD 
IGKFTSFYVE PTQLYPKPQP TVKIPQQTLN GITSYYDQAL KRELGKSLPL ASGPGPGVIV
VRAAITAVSS KTEGLHAYEV IPVALVAAAV STASGIRDQE TTLATEAVFL DGGTNKVAAQ
VVRKGTGKPL ENDSQVMKAD DVKSVIDGWA SDLHQSYLKL KAK