Gene Pfl01_2504 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2504 
Symbol 
ID3712194 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp2862637 
End bp2863569 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content64% 
IMG OID 
ProductPpiC-type peptidyl-prolyl cis-trans isomerase 
Protein accessionYP_348235 
Protein GI77458729 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.376501 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTAATCA GCGCCGCTGC GGTGGCGCTG TTGGTGGTGG CCGTGGCGCT GGTGGTGCGG 
CCGGGCAATG ACCCGGTCGC CGCCCAGCAA CCGGCGCCGG TGATTGCGGC GAACAGTGGG
CCTGCGGTGG CGCGGTTGGG TAATCAGCAG GTTTCACCGG AGGAATTGCA GGCATTGCTG
GCGGCTGTTC CACCGCAAAC CCGCGAGCAA CTGCGCGGTA ATCGTGAGGC GCTGGAGCGC
TGGATTCGTT CACGCCTGGC TGAAAAAGCC GTGTTGGAGC AGGCCGACGC TCAGGGTTGG
GCGCAGCGTC CGGACGTGGT TCGGCAAACC CGCGCCGCCA CCGAACAGAT CGTGTTCCGC
GACTATTTGC AGTCGGTGAG CCAAGTGCCG GCCGATTATC CGAGCGCTGC AGAGTTGCAG
CAGGCGTATG ACGCGGGCAA GGCCAATTGG CAGACGCCGG CGCTGTATCG GGTCAGCCAG
ATTTTCCTCG GGGTCAACGA ACCACAGAAT CTTGAGGCGG TGCGCAAGCA GGCGACGGAG
TTGAGCAAGA AAGCCCAGGC AACCTCGGCA GACTTTGCAG GCCTGGCCAA GGAGTTTTCC
CAGGATCGGC TAACCGCTGA GCGCGGCGGC GACACCGGCC TGCAACCGTT GCAGCAACTG
GTGCCGGAAG TGCGTGGTGT CGTGGCGCGG CTCAAGGTTG GCGCGGTTTC CGATCCCGTT
CAAAGCAGCG GCGGCTTCCA CGTGATCAAA CTCACTGAGC AACAACCGGC CCGCACCGCG
ACCCTCGACG AATTGCGTGA CCAACTGACC CAGGCCTTGC GGGCACAGCG TCAGGAACAG
ATCGCCCAGG CCTATCTGGA CGGCATGCTC AACACCGCAA CGCTGAGTAT CGACGGGGCC
GAGCTCAATA AGGTGCTGGA GACCAAACCC TAA
 
Protein sequence
MVISAAAVAL LVVAVALVVR PGNDPVAAQQ PAPVIAANSG PAVARLGNQQ VSPEELQALL 
AAVPPQTREQ LRGNREALER WIRSRLAEKA VLEQADAQGW AQRPDVVRQT RAATEQIVFR
DYLQSVSQVP ADYPSAAELQ QAYDAGKANW QTPALYRVSQ IFLGVNEPQN LEAVRKQATE
LSKKAQATSA DFAGLAKEFS QDRLTAERGG DTGLQPLQQL VPEVRGVVAR LKVGAVSDPV
QSSGGFHVIK LTEQQPARTA TLDELRDQLT QALRAQRQEQ IAQAYLDGML NTATLSIDGA
ELNKVLETKP