Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_2485 |
Symbol | |
ID | 3715265 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 2840984 |
End bp | 2844073 |
Gene Length | 3090 bp |
Protein Length | 1029 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | |
Product | acriflavin resistance protein |
Protein accession | YP_348216 |
Protein GI | 77458710 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000175334 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.956638 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGAAG GACGATTCAA CCTTTCCGCC ATCGCCGTTC GCGAGCGGGC GATCACGGTC TTTCTGATTT TCCTGATTGC CGTTGCCGGC ACCCTGGCGT TCTTCCAGTT GGGGCGTGCC GAAGACCCTC CATTTACCGT CAAGCAGTTG ACCGTCATCA CGGCATGGCC GGGGGCGACC GCACAGGAGA TGCAGGATCA GGTCGCGGAG CCACTGGAAA AACGCCTGCA AGAACTCAAA TGGTACGACC GCTCGGAAAC CTATACGCGG CCAGGGCTCG CTTTCACGAT GGTCTCGTTG CTCGATAGCA CGCCGCCTTC GCAAGTGCAG GAAGAGTTCT ATCAGGCGCG TAAAAAACTT GACGATGAAG CCATCAAGTT GCCGGCGGGC GTCATCGGGC CGATGGTCAA CGACGAATAT TCGGACGTGA CCTTTGCGCT GTTCGCCCTG AAAGCCAAGG GCGAGCCACA GCGTCTGCTG GTACGCGATG CGGAGTCCAT GCGCCAGCGC CTGTTGCATG TGCCGGGGGT AAAGAAGGTC AATATCATCG GCGAACAAGC CGAACGGATA TTTGTTTCTT TCTCCCATGA GCGGTTGGCG ACCCTGGGCT TGTCGCCGCA GGACATCTTC GCCGCGCTGA ACAGCCAGAA CGCACTGACC CCGGCCGGAT CAATCGACAC CAGCGGGCCA CAGGTTTTTC TGCGTCTCGA TGGTGCGTTC GACAAACTGC AGAAAATCCG CGACACCCCT GTGGTCCTGC AAGGGCGGAC ACTCAAGCTG TCTGATGTGG CGACGGTCGA ACGCGGTTAT GAAGACCCGG CCACCTTTAT GGTGCGCAAT AACGGTGAAG AGGCGCTGTT GCTCGGCGTG GTGATGCGCG AGGGCTGGAA CGGTCTTGAT CTGGGCAAGG CGCTGGATGC CGAGATCGTC AGGATCAATG AGGAAATGCC CTTGGGTATG ACCCTCTCGA AAGTCACCGA CCAGGCAGTG AATATCGACT CCGCTGTCGG CGAGTTCATG GTCAAGTTCT TCGTCGCGCT GCTGGTGGTC ATGCTCGTCT GCTTTCTGAG CATGGGCTGG CGTGTCGGCG TGGTGGTCGC CGCTGCCGTA CCTTTGACCC TGGCGATCGT GTTTGTGGTG ATGGCGGCCA CCGGCAAGAA TTTCGACCGT ATTACCCTCG GGTCATTGAT CCTGGCGCTT GGTTTGCTGG TCGACGATGC GATCATTGCC ATTGAGATGA TGGTGGTGAA AATGGAGGAG GGCTACGATC GCATCAAGGC GTCTGCCTAT GCCTGGAGCC ACACGGCGGC GCCGATGCTG TCCGGAACCC TGGTGACGGC GATCGGTTTT TTGCCGAACG GTTTCGCTCA GTCCACGGCC GGCGAATACA CCAGCAACAT GTTCTGGATC GTGGGCATCG CTCTCATCGC CTCGTGGGTC GTCGCAGTGG CGTTCACCCC TTATCTGGGC GTGAAACTCT TGCCGGACAT CAAGGCTGTG GAGGGTGGAC ACGCGGCGAT CTACAACACG CCGCGATACA ACCGTTTTCG CCGGGTTCTG ACCCGGGTCA TTGCACGCAA ATGGTGGGTC GCAGGCATGG TCATTGCGCT GTTCTTCGTG GCCGCTGCGG GCATGGGCCT GGTGAAGAAA CAGTTCTTCC CGACCTCTGA CCGTCCTGAA GTCATGATCG AAGTGCAAAT GCCCTACGGC ACTTCCATCG AGCAGACCAG CGCCACGGCC GCCAAGGTCG AAGCCTGGTT GCGCCAGCAG GAGGAGGCAA AAATCGTCAC GGCCTATATC GGCCAGGGTG CACCGCGTTT CTTCCTGGCG ATGGCGCCCG AACTGCCCGA TCCGTCGTTC GCCAAGATCG TGGTGCTGAC CGACAGTCAG GAGGCACGAG AAACCCTCAA GTTGCGTTTT CGTGACGCGG TGGCTCAAGG GCTTGCCCCT GAGGCGCGCC TCAGGGCATC GCAGATTGTG TTTGGTCCTT ATTCGCCATT TCCAGTGGCT TACCGGGTGA TGGGGCCTGA TCCGGCGAAG TTGCGCGTAA TCGCCGAGCA GGTGCGGAGC GTGATGCAGG ACAGCCCGAT GATGAGAACC GTGAACACTG ATTGGGGGCC GCTGACGCCG TCGTTGCATT TCAACCTGGA TCAGGACCGT CTACAGGCAG TGGGGCTGAC ATCGACTGCG GTTGCACAGC AATTGCAGTT CCTGCTCAGC GGAGTACCGA TTACGGCGGT GCGTGAAGAT ATCCGTTCGG TACAGGTGAT GGGGCGGGCA GCGGGCGATA TCCGGCTCGA TCCGCAGCAA ATCGAAGGCT TCACCTTGGT CGGTGCGTCG GGACAGCGAA TCCCGTTGTC GCAGATCGGC GAGGTCGATG TGCGCATGGA GGATCCGATC CTGCGCCGGC GTGATCGCAC CCCGACCATC ACCGTGCGCG GCGACATTGC CGAGGACTTG CAGCCACCGG ATGTTTCCAA TGCGCTGCTG AAGCAACTGC AGCCGATCAT CGAGAAGCTG CCTTCCGGTT ACCGGATCGA GCAGGCGGGC GCGATCGAAG AATCCGGCAA GGCCGGCAAG GCGATCCTGC CGTTGTTGCC GATCATGATC GCCATGACCC TGGTCATCAT CATTGTGCAG GTCCGTTCGA TCTCGGCGAT GATCATGGTG TTCCTGACCT CGCCGTTAGG CTTGATAGGC GTGGTGCCGA CACTGCTCAT CTTCAATCAG CCGTTTGGCA TCAATGCGCT GGTCGGGTTG ATTGCACTGT CGGGGATCCT GATGCGCAAT ACGCTGATTC TGATCGGCCA GATTCATCAC AACGCGCAAG AAGGGCTGGA TCCGTTTCAC GCTGTCGTCG AAGCCACGGT GCAACGTGCG CGACCGGTAC TGTTGACGGC CCTGGCGGCA ATCCTGGCGT TCATTCCCCT GACGCACTCG GTATTTTGGG GGACGCTGGC CTATACCCTG ATTGGCGGTA CGCTCGTCGG CACCGTCATG ACGCTGGTGT TCCTGCCCGC GATGTACTCG ATCTGGTTCA AAATCGGTCC TGACGCCAGG CCGCCGGCTG CAACAGTCAA ACCGGAGTAG
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Protein sequence | MSEGRFNLSA IAVRERAITV FLIFLIAVAG TLAFFQLGRA EDPPFTVKQL TVITAWPGAT AQEMQDQVAE PLEKRLQELK WYDRSETYTR PGLAFTMVSL LDSTPPSQVQ EEFYQARKKL DDEAIKLPAG VIGPMVNDEY SDVTFALFAL KAKGEPQRLL VRDAESMRQR LLHVPGVKKV NIIGEQAERI FVSFSHERLA TLGLSPQDIF AALNSQNALT PAGSIDTSGP QVFLRLDGAF DKLQKIRDTP VVLQGRTLKL SDVATVERGY EDPATFMVRN NGEEALLLGV VMREGWNGLD LGKALDAEIV RINEEMPLGM TLSKVTDQAV NIDSAVGEFM VKFFVALLVV MLVCFLSMGW RVGVVVAAAV PLTLAIVFVV MAATGKNFDR ITLGSLILAL GLLVDDAIIA IEMMVVKMEE GYDRIKASAY AWSHTAAPML SGTLVTAIGF LPNGFAQSTA GEYTSNMFWI VGIALIASWV VAVAFTPYLG VKLLPDIKAV EGGHAAIYNT PRYNRFRRVL TRVIARKWWV AGMVIALFFV AAAGMGLVKK QFFPTSDRPE VMIEVQMPYG TSIEQTSATA AKVEAWLRQQ EEAKIVTAYI GQGAPRFFLA MAPELPDPSF AKIVVLTDSQ EARETLKLRF RDAVAQGLAP EARLRASQIV FGPYSPFPVA YRVMGPDPAK LRVIAEQVRS VMQDSPMMRT VNTDWGPLTP SLHFNLDQDR LQAVGLTSTA VAQQLQFLLS GVPITAVRED IRSVQVMGRA AGDIRLDPQQ IEGFTLVGAS GQRIPLSQIG EVDVRMEDPI LRRRDRTPTI TVRGDIAEDL QPPDVSNALL KQLQPIIEKL PSGYRIEQAG AIEESGKAGK AILPLLPIMI AMTLVIIIVQ VRSISAMIMV FLTSPLGLIG VVPTLLIFNQ PFGINALVGL IALSGILMRN TLILIGQIHH NAQEGLDPFH AVVEATVQRA RPVLLTALAA ILAFIPLTHS VFWGTLAYTL IGGTLVGTVM TLVFLPAMYS IWFKIGPDAR PPAATVKPE
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