Gene Pfl01_2482 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2482 
Symbol 
ID3715262 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp2836861 
End bp2838132 
Gene Length1272 bp 
Protein Length423 aa 
Translation table11 
GC content59% 
IMG OID 
Productaromatic hydrocarbon degradation protein 
Protein accessionYP_348213 
Protein GI77458707 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAA TAATGCTCAA GAATCCCGTC GGCCTGGCGG TCGCGCTGGT GTCCTCCAAT 
GTGTTGGCCG GTGGTTTTGC CCTCAACGAA CAAAGCATCA GCGGGATGGG GTCCGGGTTT
GCGGGACGAT CTTCATCCGC CGAAGACGCC AGTACGATCT ACGGCAACCC GGCAGGCATG
GCGCGGCTTA AACGAGAGCA GGTGAGCGTG GGGGCGGCGA CGCTGTTCGC CAAATCGGAC
ATCAGCCAGA CACGCAGTAC GTTTGGGGGG AAGGAAGACG GCGACATGGT GCCCGCCACC
ACAGTACCGA TGGGGTATTA CGTGAAACCG ATCGATGAGC ATTGGGCATT CGGCGTCGGG
TTTTATGTGC CTTTCGGGCT GATCACCGAC TACGGCAGTG GTTTTGCCGG CCGCTATTAC
GCCAACAAGA GTGAAGTCAC CACGCTGACC TTTCAGCCGA CCATCAGCTA CGCCTTTAAC
GAAAAGGTGT CGATCGGATT CGGGCCGACC ATCAATCGTA TCGGCGGAGA GATATCGGGC
ATGGTGCCCA ATCCACTCAG CCCCGGGCGC AACGACGGCA AACTCAAAAG CACCGGCGAT
GACACCGCAC TGGGCTTCAA TGCTGGCGTG CTGGTGCAGG CGACCGATCA GACCCGCCTG
GGCCTGACGT ATCACTCCAA AGTCAGTTAC CACCTGGACG CCAAAACCAA GGTCACCGAT
GGCATCTTCA GCGTGCTGGG CGTCAGCGGC CGTAGCTATG ACGCATCGCT GGATGTGGAC
ACGCCGGAGT CGGTGGACTT TTCGCTGACG CATCAATTCA ACGACGACTG GACGCTCTAT
GTGGGCAGCA CCTGGACACG CTGGAGCCGC TTCAAGGAAC TGACCATTGA GAACAGCGGC
TTGCCGCCGT TGCTGAGCGG GCAATTGGGG ACGATCAGCG AAGAACAGAA CTGGCATGAC
ACCTGGGCTC ACGCGATCGG TGCGGCCTAT CGATTGAATA ACCAATGGGT GCTGCGTGGC
GGGTTTTCGG TCGATCAGTC ACCCGCCAAC AACACCAATC GGGGGCCGCG CATTCCGACG
GGCGACCGTA AGGTTGTCAG CTTCGGCGCC GGCTGGACAC CCGTGGACAA TGTCACGATC
GATCTCGCGT ATTCCTATCT TTGGGAGGAA AGCGTCGAGG TCAACGACAC CTCGGCATCG
AGGGGGGCCT ACCGTGCCAG GTACAAGAAC AGTGCCAGCG GGTTCGGTAC GTCGGTCAGT
TATCGCTTCT AG
 
Protein sequence
MKKIMLKNPV GLAVALVSSN VLAGGFALNE QSISGMGSGF AGRSSSAEDA STIYGNPAGM 
ARLKREQVSV GAATLFAKSD ISQTRSTFGG KEDGDMVPAT TVPMGYYVKP IDEHWAFGVG
FYVPFGLITD YGSGFAGRYY ANKSEVTTLT FQPTISYAFN EKVSIGFGPT INRIGGEISG
MVPNPLSPGR NDGKLKSTGD DTALGFNAGV LVQATDQTRL GLTYHSKVSY HLDAKTKVTD
GIFSVLGVSG RSYDASLDVD TPESVDFSLT HQFNDDWTLY VGSTWTRWSR FKELTIENSG
LPPLLSGQLG TISEEQNWHD TWAHAIGAAY RLNNQWVLRG GFSVDQSPAN NTNRGPRIPT
GDRKVVSFGA GWTPVDNVTI DLAYSYLWEE SVEVNDTSAS RGAYRARYKN SASGFGTSVS
YRF