Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_2482 |
Symbol | |
ID | 3715262 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 2836861 |
End bp | 2838132 |
Gene Length | 1272 bp |
Protein Length | 423 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | |
Product | aromatic hydrocarbon degradation protein |
Protein accession | YP_348213 |
Protein GI | 77458707 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAAA TAATGCTCAA GAATCCCGTC GGCCTGGCGG TCGCGCTGGT GTCCTCCAAT GTGTTGGCCG GTGGTTTTGC CCTCAACGAA CAAAGCATCA GCGGGATGGG GTCCGGGTTT GCGGGACGAT CTTCATCCGC CGAAGACGCC AGTACGATCT ACGGCAACCC GGCAGGCATG GCGCGGCTTA AACGAGAGCA GGTGAGCGTG GGGGCGGCGA CGCTGTTCGC CAAATCGGAC ATCAGCCAGA CACGCAGTAC GTTTGGGGGG AAGGAAGACG GCGACATGGT GCCCGCCACC ACAGTACCGA TGGGGTATTA CGTGAAACCG ATCGATGAGC ATTGGGCATT CGGCGTCGGG TTTTATGTGC CTTTCGGGCT GATCACCGAC TACGGCAGTG GTTTTGCCGG CCGCTATTAC GCCAACAAGA GTGAAGTCAC CACGCTGACC TTTCAGCCGA CCATCAGCTA CGCCTTTAAC GAAAAGGTGT CGATCGGATT CGGGCCGACC ATCAATCGTA TCGGCGGAGA GATATCGGGC ATGGTGCCCA ATCCACTCAG CCCCGGGCGC AACGACGGCA AACTCAAAAG CACCGGCGAT GACACCGCAC TGGGCTTCAA TGCTGGCGTG CTGGTGCAGG CGACCGATCA GACCCGCCTG GGCCTGACGT ATCACTCCAA AGTCAGTTAC CACCTGGACG CCAAAACCAA GGTCACCGAT GGCATCTTCA GCGTGCTGGG CGTCAGCGGC CGTAGCTATG ACGCATCGCT GGATGTGGAC ACGCCGGAGT CGGTGGACTT TTCGCTGACG CATCAATTCA ACGACGACTG GACGCTCTAT GTGGGCAGCA CCTGGACACG CTGGAGCCGC TTCAAGGAAC TGACCATTGA GAACAGCGGC TTGCCGCCGT TGCTGAGCGG GCAATTGGGG ACGATCAGCG AAGAACAGAA CTGGCATGAC ACCTGGGCTC ACGCGATCGG TGCGGCCTAT CGATTGAATA ACCAATGGGT GCTGCGTGGC GGGTTTTCGG TCGATCAGTC ACCCGCCAAC AACACCAATC GGGGGCCGCG CATTCCGACG GGCGACCGTA AGGTTGTCAG CTTCGGCGCC GGCTGGACAC CCGTGGACAA TGTCACGATC GATCTCGCGT ATTCCTATCT TTGGGAGGAA AGCGTCGAGG TCAACGACAC CTCGGCATCG AGGGGGGCCT ACCGTGCCAG GTACAAGAAC AGTGCCAGCG GGTTCGGTAC GTCGGTCAGT TATCGCTTCT AG
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Protein sequence | MKKIMLKNPV GLAVALVSSN VLAGGFALNE QSISGMGSGF AGRSSSAEDA STIYGNPAGM ARLKREQVSV GAATLFAKSD ISQTRSTFGG KEDGDMVPAT TVPMGYYVKP IDEHWAFGVG FYVPFGLITD YGSGFAGRYY ANKSEVTTLT FQPTISYAFN EKVSIGFGPT INRIGGEISG MVPNPLSPGR NDGKLKSTGD DTALGFNAGV LVQATDQTRL GLTYHSKVSY HLDAKTKVTD GIFSVLGVSG RSYDASLDVD TPESVDFSLT HQFNDDWTLY VGSTWTRWSR FKELTIENSG LPPLLSGQLG TISEEQNWHD TWAHAIGAAY RLNNQWVLRG GFSVDQSPAN NTNRGPRIPT GDRKVVSFGA GWTPVDNVTI DLAYSYLWEE SVEVNDTSAS RGAYRARYKN SASGFGTSVS YRF
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