Gene Pfl01_2465 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2465 
Symbol 
ID3715283 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp2819788 
End bp2820729 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content59% 
IMG OID 
ProductAraC family transcriptional regulator 
Protein accessionYP_348196 
Protein GI77458690 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACTA GTGAGAGCCT TGAAATGGAA CAAAGCGATG CTTTCATCCT GCAGAACACG 
GCCATCTACC GTGACGAACT GGTTCGCCTG CTGACTCAAC GCTTTACCAC ACCCGGCATC
TATGAGACCG CCATAGCTCC GCTGCATGTG ATTCGTTTCG ATGCACCTTC GGAGCTGATC
CATACCGTGC ACAAACCGGC ACTTTGCCTG ATCGTGCAAG GACAAAAGGA AATCAGCCTG
GGTGACGATC ATTACCTCTA CGATCCGCTC AGTTACCTGG TGGTCTCGGT GACGCTCCCG
GTTGCCGGGC GCGTGCTGAA GGCCAGTCCG GAAGCGCCCT ACCTGTGTAT CCGGTTCGAT
TTCGAGGCCA CGGAAATTGC CCAGGTCATC GCCGACGCGC CGCCGGCGGG CGTACCGGAC
GAGCCGGAAC TGGGCCTTTT CCTTGAAAGG GTCGATGTGC CCCTGCTGGA AACCATGCTT
CGACTGGTCC GACTGCTGGA CACCCCGAAA GACATCGGCA TGCTGGCACC TCTGGCCTTG
CGGGAGCTGT ATTACCGCCT TCTACGCGGC ATGCACGGCC GTCGTTTGTA TGAGCTTGCC
CTCGGCGACT CGCAAACACG TCGGGTTACG CGGGCAATCG ATTGGTTGAA CAACCACTAC
ACCCAACCCT TGCGCATCGA AGAACTCGCC CGGGTCGCCA ATTTGGGTAA CTCCACATTG
CATCATCGCT TCAAGGCAGT GACCGCCATG AGTCCGCTGC AGTATCAGAA ACAACTGCGC
CTGCAGGAAG CCCGCCGGCT GTTGCTCGGC GAAGGGCTGG ATGTGGCGAG CGCCTGTTAT
CGAGCGGGCT ACGAAAGCCC GTCGCAATTC AGCCGGGAAT ACAGTCGCCA GTTTGGCTGC
CCACCTTCCA AAGATGCCAG CCGCACGCGT CGCACGGGGT AA
 
Protein sequence
MNTSESLEME QSDAFILQNT AIYRDELVRL LTQRFTTPGI YETAIAPLHV IRFDAPSELI 
HTVHKPALCL IVQGQKEISL GDDHYLYDPL SYLVVSVTLP VAGRVLKASP EAPYLCIRFD
FEATEIAQVI ADAPPAGVPD EPELGLFLER VDVPLLETML RLVRLLDTPK DIGMLAPLAL
RELYYRLLRG MHGRRLYELA LGDSQTRRVT RAIDWLNNHY TQPLRIEELA RVANLGNSTL
HHRFKAVTAM SPLQYQKQLR LQEARRLLLG EGLDVASACY RAGYESPSQF SREYSRQFGC
PPSKDASRTR RTG