Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_2462 |
Symbol | |
ID | 3715280 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 2815924 |
End bp | 2818098 |
Gene Length | 2175 bp |
Protein Length | 724 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | |
Product | TonB-dependent siderophore receptor |
Protein accession | YP_348193 |
Protein GI | 77458687 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGCGCC CCACCTCGCC ACATCGTTTC AACCCGTCAC GCAACCTCCT GTCCATGGCC ATCTGCATGG CCGTCATGAC CCCGGCGCTG GCCGATGAAA CCCGCGAGGT GCAGGACACC GCCCCGCCCG CCACCCTCGA ACTCGGCGCG ACTGCAATCA CATCCACCCA ACTGGGCAGT ACCACCGAAG GCTCGGAGTC GTACACCACC GGCACCATGG CCACCGCCAC CAAACTGCCG TTGACCCTGC GCGAAACACC ACAAGCCGTC ACCGTCATCA CCCGCCAGCG CATGGACGAT CAGGCGATGA CCAGCATCAA TGACGTGGTC AACGCCACGC CGGGGCTGTT CCTCGACTAC TCCAACGGCC CCGGCCGACA GGCCTACAAA GCCCGGGGCT TCAACATCGA CAACCTGATG TACGACGGCA TTCCGAGCGG CTACGACGGC GTGAACGTCG GCTCCCAGCC GAATCTGGCG ATGTTCGACC GGGTTGAAGT CGTTCGGGGC GCGACCGGTC TGGTCACCGG TGCCGGCAAC CCTTCGGCGG CGATCAACCT GGTGCGCAAA CGCCCATTGG CCGAGCAGCG CGTGACCCTG ACCGGCGCCG CCGGGACCTG GGACAACTAT CGCGGCGAGC TCGATGCTTC CAGCCCGCTC AATGACAGCG GCACCCTGCG CGGCCGGGTG GTCACGTCCT ACCACGACGC CAACAGCTTC ATCGATGACG TCGACGAGCA ACACAACCTG TTCTACGCCG TCACCGAAGC CGATCTGAGC GACGACACCA CTTTGACCCT CGGTTTCTCG CACCAAAAGG ACAGGACCAA CTACTTTTGG GGTTCATCAA TGATCGGCCT CGACGGCCAT CACCTCGACC TCCCGCGCTC GTACAACCCC GGCACTTCCT GGGAAGACAA GGATCAGGAA ATCAACACCG TCTTCGCCGA GATCCGTCAG CAACTGGCCA ACGACTGGAA GCTGCAGGTC AACGCCAACT ATTCCGAGCA GAACGCGCTG TTCTCCGGCT CGTACCAGTC GCGCTGGGTC AACGACACCC TGGCCCGCAC GGTTTACCAA TCCAAGGCCG ATGAAAACCA GGCCGGTCTC GACGCCTTCT TCAGCGGCCC GTTCGAAGCC TTCGGACGCA GCCATGAACT GGTGGTCGGC GCCAGCAAAC GCATCTACGA CCTGACCACC CACAACTACT CGCCGTACGA CACCAACTGG CCGATCAACG CCGGCAAGCC GGACTTCGTC CACACCAACA ACACACGTGA AGTCACCACT CAGGACGGCG TATACCTGAC CACCCGCCTG AGCCTGGCCG ACCCGCTGAA ACTGATCCTC GGCGGACGTC TGGACTGGTA CGACTACGAC AACCGCGATG GCGACGGCGA TTACAAAGTC ACCCGCAACG TCACCCGCTA TGCCGGCCTG ATCTACGAGC TGGACGACCA TCATTCGGTG TACGCCAGCT ACAGCGACAT CTTCACCCCG CAGAGCAACA AGGGCACCTC CGGTAACCCG GTCAAGCCGA TCGTGGGCAA GAACTACGAG GTCGGCATCA AGGGCGAATA CCTGGGCGGC GCGCTGAATG CCAGCCTCGC CGTGTTCCGT GTCGATCAGG AAAACCGCGC GGTGCAGGTG TTCGTGCCGA ACTGCCCGCA GTCTTCCTGC TATGAGGCCT CCGGCGAGAT CCGCAGCCAG GGTATCGACT TCGAACTGCA AGGCGCGCTC ACCGACAACT GGCAGATCGG CGGCGGCTAC ACCTACGCCC GTACGCACAC CATCAAGGAT GAGGCGAACC CGCAGAACGT GAACAAGCAG TTCGACACCG ACACGCCGGA GCACCTGTTC AAACTGACCA CCCGCTACAA CTTTCAGGGC CCGCTGGAAA AACTTCGCGT GGGCGGCAAC ATTTCCTGGC AGAGCCGCAT GTACAACGAC ATCGAACTGC TCGATGGCGG CAACTACCGA CTCAAGCAAG GCGCGTACGC CGTGACCGAC CTGATGGCCG GCTACCGGGT CAATGAAAAC CTCAACCTGC AACTCAACGC CAACAACATC TTCGACCGCA AGTACTACTC CACCATCGCC AACTCCGTCA GCTACGGCGG CGACAGCTAT GGCAGCCCGC GCAACATGAT GTTGACGGCC AAATACACCT TCTAA
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Protein sequence | MSRPTSPHRF NPSRNLLSMA ICMAVMTPAL ADETREVQDT APPATLELGA TAITSTQLGS TTEGSESYTT GTMATATKLP LTLRETPQAV TVITRQRMDD QAMTSINDVV NATPGLFLDY SNGPGRQAYK ARGFNIDNLM YDGIPSGYDG VNVGSQPNLA MFDRVEVVRG ATGLVTGAGN PSAAINLVRK RPLAEQRVTL TGAAGTWDNY RGELDASSPL NDSGTLRGRV VTSYHDANSF IDDVDEQHNL FYAVTEADLS DDTTLTLGFS HQKDRTNYFW GSSMIGLDGH HLDLPRSYNP GTSWEDKDQE INTVFAEIRQ QLANDWKLQV NANYSEQNAL FSGSYQSRWV NDTLARTVYQ SKADENQAGL DAFFSGPFEA FGRSHELVVG ASKRIYDLTT HNYSPYDTNW PINAGKPDFV HTNNTREVTT QDGVYLTTRL SLADPLKLIL GGRLDWYDYD NRDGDGDYKV TRNVTRYAGL IYELDDHHSV YASYSDIFTP QSNKGTSGNP VKPIVGKNYE VGIKGEYLGG ALNASLAVFR VDQENRAVQV FVPNCPQSSC YEASGEIRSQ GIDFELQGAL TDNWQIGGGY TYARTHTIKD EANPQNVNKQ FDTDTPEHLF KLTTRYNFQG PLEKLRVGGN ISWQSRMYND IELLDGGNYR LKQGAYAVTD LMAGYRVNEN LNLQLNANNI FDRKYYSTIA NSVSYGGDSY GSPRNMMLTA KYTF
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