Gene Pfl01_2462 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2462 
Symbol 
ID3715280 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp2815924 
End bp2818098 
Gene Length2175 bp 
Protein Length724 aa 
Translation table11 
GC content62% 
IMG OID 
ProductTonB-dependent siderophore receptor 
Protein accessionYP_348193 
Protein GI77458687 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCGCC CCACCTCGCC ACATCGTTTC AACCCGTCAC GCAACCTCCT GTCCATGGCC 
ATCTGCATGG CCGTCATGAC CCCGGCGCTG GCCGATGAAA CCCGCGAGGT GCAGGACACC
GCCCCGCCCG CCACCCTCGA ACTCGGCGCG ACTGCAATCA CATCCACCCA ACTGGGCAGT
ACCACCGAAG GCTCGGAGTC GTACACCACC GGCACCATGG CCACCGCCAC CAAACTGCCG
TTGACCCTGC GCGAAACACC ACAAGCCGTC ACCGTCATCA CCCGCCAGCG CATGGACGAT
CAGGCGATGA CCAGCATCAA TGACGTGGTC AACGCCACGC CGGGGCTGTT CCTCGACTAC
TCCAACGGCC CCGGCCGACA GGCCTACAAA GCCCGGGGCT TCAACATCGA CAACCTGATG
TACGACGGCA TTCCGAGCGG CTACGACGGC GTGAACGTCG GCTCCCAGCC GAATCTGGCG
ATGTTCGACC GGGTTGAAGT CGTTCGGGGC GCGACCGGTC TGGTCACCGG TGCCGGCAAC
CCTTCGGCGG CGATCAACCT GGTGCGCAAA CGCCCATTGG CCGAGCAGCG CGTGACCCTG
ACCGGCGCCG CCGGGACCTG GGACAACTAT CGCGGCGAGC TCGATGCTTC CAGCCCGCTC
AATGACAGCG GCACCCTGCG CGGCCGGGTG GTCACGTCCT ACCACGACGC CAACAGCTTC
ATCGATGACG TCGACGAGCA ACACAACCTG TTCTACGCCG TCACCGAAGC CGATCTGAGC
GACGACACCA CTTTGACCCT CGGTTTCTCG CACCAAAAGG ACAGGACCAA CTACTTTTGG
GGTTCATCAA TGATCGGCCT CGACGGCCAT CACCTCGACC TCCCGCGCTC GTACAACCCC
GGCACTTCCT GGGAAGACAA GGATCAGGAA ATCAACACCG TCTTCGCCGA GATCCGTCAG
CAACTGGCCA ACGACTGGAA GCTGCAGGTC AACGCCAACT ATTCCGAGCA GAACGCGCTG
TTCTCCGGCT CGTACCAGTC GCGCTGGGTC AACGACACCC TGGCCCGCAC GGTTTACCAA
TCCAAGGCCG ATGAAAACCA GGCCGGTCTC GACGCCTTCT TCAGCGGCCC GTTCGAAGCC
TTCGGACGCA GCCATGAACT GGTGGTCGGC GCCAGCAAAC GCATCTACGA CCTGACCACC
CACAACTACT CGCCGTACGA CACCAACTGG CCGATCAACG CCGGCAAGCC GGACTTCGTC
CACACCAACA ACACACGTGA AGTCACCACT CAGGACGGCG TATACCTGAC CACCCGCCTG
AGCCTGGCCG ACCCGCTGAA ACTGATCCTC GGCGGACGTC TGGACTGGTA CGACTACGAC
AACCGCGATG GCGACGGCGA TTACAAAGTC ACCCGCAACG TCACCCGCTA TGCCGGCCTG
ATCTACGAGC TGGACGACCA TCATTCGGTG TACGCCAGCT ACAGCGACAT CTTCACCCCG
CAGAGCAACA AGGGCACCTC CGGTAACCCG GTCAAGCCGA TCGTGGGCAA GAACTACGAG
GTCGGCATCA AGGGCGAATA CCTGGGCGGC GCGCTGAATG CCAGCCTCGC CGTGTTCCGT
GTCGATCAGG AAAACCGCGC GGTGCAGGTG TTCGTGCCGA ACTGCCCGCA GTCTTCCTGC
TATGAGGCCT CCGGCGAGAT CCGCAGCCAG GGTATCGACT TCGAACTGCA AGGCGCGCTC
ACCGACAACT GGCAGATCGG CGGCGGCTAC ACCTACGCCC GTACGCACAC CATCAAGGAT
GAGGCGAACC CGCAGAACGT GAACAAGCAG TTCGACACCG ACACGCCGGA GCACCTGTTC
AAACTGACCA CCCGCTACAA CTTTCAGGGC CCGCTGGAAA AACTTCGCGT GGGCGGCAAC
ATTTCCTGGC AGAGCCGCAT GTACAACGAC ATCGAACTGC TCGATGGCGG CAACTACCGA
CTCAAGCAAG GCGCGTACGC CGTGACCGAC CTGATGGCCG GCTACCGGGT CAATGAAAAC
CTCAACCTGC AACTCAACGC CAACAACATC TTCGACCGCA AGTACTACTC CACCATCGCC
AACTCCGTCA GCTACGGCGG CGACAGCTAT GGCAGCCCGC GCAACATGAT GTTGACGGCC
AAATACACCT TCTAA
 
Protein sequence
MSRPTSPHRF NPSRNLLSMA ICMAVMTPAL ADETREVQDT APPATLELGA TAITSTQLGS 
TTEGSESYTT GTMATATKLP LTLRETPQAV TVITRQRMDD QAMTSINDVV NATPGLFLDY
SNGPGRQAYK ARGFNIDNLM YDGIPSGYDG VNVGSQPNLA MFDRVEVVRG ATGLVTGAGN
PSAAINLVRK RPLAEQRVTL TGAAGTWDNY RGELDASSPL NDSGTLRGRV VTSYHDANSF
IDDVDEQHNL FYAVTEADLS DDTTLTLGFS HQKDRTNYFW GSSMIGLDGH HLDLPRSYNP
GTSWEDKDQE INTVFAEIRQ QLANDWKLQV NANYSEQNAL FSGSYQSRWV NDTLARTVYQ
SKADENQAGL DAFFSGPFEA FGRSHELVVG ASKRIYDLTT HNYSPYDTNW PINAGKPDFV
HTNNTREVTT QDGVYLTTRL SLADPLKLIL GGRLDWYDYD NRDGDGDYKV TRNVTRYAGL
IYELDDHHSV YASYSDIFTP QSNKGTSGNP VKPIVGKNYE VGIKGEYLGG ALNASLAVFR
VDQENRAVQV FVPNCPQSSC YEASGEIRSQ GIDFELQGAL TDNWQIGGGY TYARTHTIKD
EANPQNVNKQ FDTDTPEHLF KLTTRYNFQG PLEKLRVGGN ISWQSRMYND IELLDGGNYR
LKQGAYAVTD LMAGYRVNEN LNLQLNANNI FDRKYYSTIA NSVSYGGDSY GSPRNMMLTA
KYTF