Gene Pfl01_2457 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2457 
Symbol 
ID3715314 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp2810068 
End bp2810778 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content64% 
IMG OID 
ProductThiJ/PfpI 
Protein accessionYP_348188 
Protein GI77458682 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCTATCC AACGTACAAA CCCCGGCGCA GAACCCGAAA CCCCGGTACA CGAACGAACC 
GTCGTGTTCG TGGCATACCC GCAAATGGGC CTGCTGGATC TGACCGGTGC GCAGACCGTT
TTCTGGGCGG CGACGTGCGG ACTGGCGCAA CTCGGTTTGC CCGGTTATGC CTTGCACACC
GCGAGCCTGC AAGGCGGACC GGTGCAGACC GGCGAAGGCC TGGTGGTTCA AACCCGGCGG
CTGGATGAGC TCGGCGACGA GCCGATCAAT ACGTTGATCG TTCCGGGCTC GGCGTTCATC
AGCCAGGCGT TGCGAGACAA CGCGCCGCTG GTCGATTGGT TGCGCGTCAC GTCAGCCACG
GCCAACCGTA CGACGTCGGT ATGCAGCGGT GCTTTTTTCC TGGCTCAGGC CGGACTGCTC
GACGGCCTGC GCGTGGCGAC ACACTGGTTG ATGGCTGACA TGTTCGAGCG GCTGTTCCCC
AGGGTCGAGC TGGATCGCGA GGCCATCTTC GTCCACCAGG CATCGGTGTG GACCTGCGCC
GGCGTCAGCG CTGGGATCGA TCTGGCGCTG GCACTGGTCG AGGCCGATCA CGGTCGCGAG
CTGGCCATGC AGGTCGCCCG GCGCATGGTG GTGTACTACC GACGCCCGGA CAACCAGAAA
CAGTGGAGTC CGCTGCTGCA ATCACAACAT TCCATCGCGC ACGAGCGCTA G
 
Protein sequence
MSIQRTNPGA EPETPVHERT VVFVAYPQMG LLDLTGAQTV FWAATCGLAQ LGLPGYALHT 
ASLQGGPVQT GEGLVVQTRR LDELGDEPIN TLIVPGSAFI SQALRDNAPL VDWLRVTSAT
ANRTTSVCSG AFFLAQAGLL DGLRVATHWL MADMFERLFP RVELDREAIF VHQASVWTCA
GVSAGIDLAL ALVEADHGRE LAMQVARRMV VYYRRPDNQK QWSPLLQSQH SIAHER