| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_2453 |
|---|
| Symbol | |
|---|
| ID | 3715310 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | - |
|---|
| Start bp | 2806628 |
|---|
| End bp | 2807647 |
|---|
| Gene Length | 1020 bp |
|---|
| Protein Length | 339 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | |
|---|
| Product | transcriptional regulator |
|---|
| Protein accession | YP_348184 |
|---|
| Protein GI | 77458678 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACTCTA TTTTTCACCA ACCCGACCCT CTCACCTGCT TGCTCGCGCA ACCGCGCACG
CTGGTGTTCC TGGCGTATCC GCAGATGGGC TTGCTGGACC TGACCGGCGC ACAAACCGTG
TTCTGGGCCG CGTCCAAGGC CATGGCCGAA CGCGGCTTGC CTGGCTACGC GTTGCACACC
GCCAGCCTGG ACGGCGGATT GATCGCCACC GCCGAAGGGC TGTCGGTCAA CACCTTGGCC
CTGCGCACCT TTGACGAGAC AACCATCGAT ACGCTGATCG TGCCCGGTGC GCCGAACATC
CGTCAGGCCA TGCTCGACAA TGTTGCGTTG GTCGACTGGC TGCGCGCGGC GTCAGCCAAG
GCCAGACGCA CCGCCTCGGT GTGCAGCGGC ACCTTTCTGC TGGCCCAGGC CGGGCTGCTG
GAAGGCTTGC GCGCAACCAC CCACTGGGGC ATGTGCGACA TGCTCAAGGG TGGTTTTCCG
AGTGTCGATG TCGACCTTGA TGCGATCTAC ATCCAGCAAG GCAACGTCTG GACTTCCGCC
GGGGTCACCA CCGGAATCGA CATGGCGCTA GCGCTGGTCG AGGCCGATTG CGGCCGCGCC
GTGGCGTTGA AGGTGGCGCG TGAGCTGGTG GTTTTTCTCA AACGCCCTGG CGGTCAGGCG
CAGTTCAGCC AGTTGCTGCA AGCGCAGATC GACGACAGAG GCTGCTTCGA AGAATTGCAC
CTGTGGATCA GCGAAAACCT CGGCGACCCG CAATTGAGCG TCGAATCGCT GGCCCGACAG
GCGCAAATGA GCCCGCGCAA TTTCGCGCGG GTCTACAAAC GCAAGATCGG CCGCACGCCG
GCCAAGGCAC TCGAGCTGTT TCGCCTGGAA GCAGCGCGAC GAATGCTCGA AGACTCTCAG
CGCAACATCG ACCAGATCGC GCAGTTGTGC GGGTTTGGCG ACGAAGAACG CATGCGCGAC
ACCTTCTACC GTCACCTCTC GGTCTCGCCC CGGGAATACC GCAGCCGGTT CTCGCGCTGA
|
|---|
| Protein sequence | MNSIFHQPDP LTCLLAQPRT LVFLAYPQMG LLDLTGAQTV FWAASKAMAE RGLPGYALHT
ASLDGGLIAT AEGLSVNTLA LRTFDETTID TLIVPGAPNI RQAMLDNVAL VDWLRAASAK
ARRTASVCSG TFLLAQAGLL EGLRATTHWG MCDMLKGGFP SVDVDLDAIY IQQGNVWTSA
GVTTGIDMAL ALVEADCGRA VALKVARELV VFLKRPGGQA QFSQLLQAQI DDRGCFEELH
LWISENLGDP QLSVESLARQ AQMSPRNFAR VYKRKIGRTP AKALELFRLE AARRMLEDSQ
RNIDQIAQLC GFGDEERMRD TFYRHLSVSP REYRSRFSR
|
|---|
| |