| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_2450 |
|---|
| Symbol | |
|---|
| ID | 3715307 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | + |
|---|
| Start bp | 2803643 |
|---|
| End bp | 2804560 |
|---|
| Gene Length | 918 bp |
|---|
| Protein Length | 305 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_348181 |
|---|
| Protein GI | 77458675 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACAAGT TGCTGGCACT GAAGATGTTC GTTGAAACCG TCCGTTGCGG TGGTTATTCC
TCGGCGGCGC GCAAACTCGG CATCTCCACC TCTTCGGTGA CACGCCAGGT GGCAGGGCTG
GAAAACGAAT TGGGCGCCAG CCTGCTCAAC CGCACGACAC GCAACACCAG CGTGACGGTC
GCCGGCCAAA CCTATTTCGA GAAAGCGGTG GCCATTCTCG ATGCCATCGA TGAGGCCGAC
GCGGTTGTCG CCGACCGTGG CAGCGATGCG CAGGGACGCC TGCGCATCAG TGTGCCGGTG
GAATTCGGCC GACAGATCAT TGCACCGCAA CTGGGGGAAT TGCTCGACCG CCATCCGGGG
CTTGAAATCA GTGTGTCGTT GAGCGATCAG GTCAGCGATC TGCTGAGTGA GCAGATCGAT
GTCTCGGTGC GCCTGGGATC ATCGGTGGTC AGTGACGATA TCGTCAGCAA GCGCGTCGGC
GGATTCCAGC GCTGGATTGT GGCGAGTCCG GATTACCTGA GCGGTCACGC TGTGCCGGCG
CATCCGCGAG ACTTGCTCGA GCATCAATGC CTGCGCTTCG ACTACGCTGG TTCGCACCAG
CACTGGACGT TCCAGGGCGA CGAGGAAACC ATCCAGCTCA ATGTGCATGG CCGCCTGCAA
AGCAACAACG CCGATATCCT GCGCGAAGCG GCGGTGGCGG GGCGCGGGGT GGCCCTGCTG
GCGGACTGGC TGGTGCGCGC CGATGTCGAG GCCGGTCGGT TGACGCGGCT GCTGGAGGGG
TATGAAGTCA ACCCCGGTAA TGCGAGCTGC TGCATCAATG CGTTGTATCT GCCCAATCAC
CGGGGCTCCA GTCGTATCAA TGTGTTCATC GACTTTCTGG AAGACATTCT GGCAGCGGAG
CCATCGACTC AACGCTAG
|
|---|
| Protein sequence | MDKLLALKMF VETVRCGGYS SAARKLGIST SSVTRQVAGL ENELGASLLN RTTRNTSVTV
AGQTYFEKAV AILDAIDEAD AVVADRGSDA QGRLRISVPV EFGRQIIAPQ LGELLDRHPG
LEISVSLSDQ VSDLLSEQID VSVRLGSSVV SDDIVSKRVG GFQRWIVASP DYLSGHAVPA
HPRDLLEHQC LRFDYAGSHQ HWTFQGDEET IQLNVHGRLQ SNNADILREA AVAGRGVALL
ADWLVRADVE AGRLTRLLEG YEVNPGNASC CINALYLPNH RGSSRINVFI DFLEDILAAE
PSTQR
|
|---|
| |