Gene Pfl01_2449 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2449 
Symbol 
ID3715306 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp2802343 
End bp2803542 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content66% 
IMG OID 
Productmajor facilitator transporter 
Protein accessionYP_348180 
Protein GI77458674 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTACGG GCAATCCGGC AGCGGCGGCC AAGGCCGAAC CATCCGCTTC TCTTTCCGGC 
CTGATGGTCG CGTTCCTGGC ATTCTGCTGC GGCGCGGTCG TGGCCAACCT TTATTACGCT
CAGCCGATCG TCGAACTGAT CGCGCCGCAG ATCGGCCTGT CCAGTGCCAA TGCCAGTCTG
ATCGTTTCCC TCACGCAGTT CGGTTATGCA TTGGGCCTGC TGTTGCTGGT GCCGCTGGCC
GACCTGATGG AAAACCGTCG GCTGGTGGTG GGCTTTACCC TGGCGGCGAG CGTGACCCTG
TTGTGCGCCG GCCTGACGCA CTCGCCGTCG ATGTTCCTGG TCCTGTCGTT GCTGATCGGC
CTCACTTCGG TGGCGGTGCA GATTCTGGTG CCGTTGGCCG CGCATCTGGC GCCCGAGGCG
ACCCGTGGGC GGGTGGTGGG CAACATCATG AGCGGCCTGT TGCTGGGCAT TCTGCTGTCG
CGGCCACTGT CGAGTCTGCT GGTGGAAGTG TTCGGCTGGC GCGGTGTGTT TTTCAGCGCA
GCGGCGCTGA TGGCTGTCAT CGCCCTGATC ATGGCGATTG CCTTGCCGCG CCGCGTCCCG
AGCCATCAGG CGACGTACGC TGCGCTGATC GGCTCGGTGT TTGCGCTGGC CCGTCGGCAC
GCGGTTCTGC GTCAGCGTTC GCTGTATCAG GGCTTGCTGT TCGCCAGTTT CAGCCTGTTC
TGGACCCTTG CACCGATCGA GCTGATGCGG CACCACGGTT TCAGTCAGGC ACAGGTGGCG
ATATTTGCAT TGGTTGGCGC TGTCGGCGCG GTCGCAGCGC CGATTGCCGG GCGCCTGGCC
GATGCCGGGC ACGGTCGGCG CGGGACGCTC GTGGCACTGT TGCTGGCGCC AGCCTCGTTG
CTGATCGCCG CGCTGCCGGG CAGCAGCTAT GTCTGGCTGG TGGTTTGCGC GGTGCTGCTG
GACTTCGCCG TGCAACTGAA CATGGTGCTG GGCCAGCGCG AGGTGTACGC CATCGACCCG
CACAGCCGGG CCCGCCTGAA TGCCGTGTAC ATGACCAGCA TCTTCGTCGG CGGCGCCCTG
GGATCGCTGG TCGCCAGTCC GCTCTACGAG CATTTCGGCT GGAACCTGTC CGCCGTGACC
GTGGCGTTGC TGCCGGCGCT GGCCCTGGCG CTGTTCCTGA GCCGCAAGGC CGATGCCTGA
 
Protein sequence
MLTGNPAAAA KAEPSASLSG LMVAFLAFCC GAVVANLYYA QPIVELIAPQ IGLSSANASL 
IVSLTQFGYA LGLLLLVPLA DLMENRRLVV GFTLAASVTL LCAGLTHSPS MFLVLSLLIG
LTSVAVQILV PLAAHLAPEA TRGRVVGNIM SGLLLGILLS RPLSSLLVEV FGWRGVFFSA
AALMAVIALI MAIALPRRVP SHQATYAALI GSVFALARRH AVLRQRSLYQ GLLFASFSLF
WTLAPIELMR HHGFSQAQVA IFALVGAVGA VAAPIAGRLA DAGHGRRGTL VALLLAPASL
LIAALPGSSY VWLVVCAVLL DFAVQLNMVL GQREVYAIDP HSRARLNAVY MTSIFVGGAL
GSLVASPLYE HFGWNLSAVT VALLPALALA LFLSRKADA