Gene Pfl01_2448 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2448 
Symbol 
ID3715305 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp2800774 
End bp2802048 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content66% 
IMG OID 
Productcytochrome c, class I 
Protein accessionYP_348179 
Protein GI77458673 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.157698 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGGCC ATTTCATGAG ATCCAGAACG CTGTGGATCA GCGCAGCAGC CCTCGCGTCG 
ATCGGGGCAA TCGCGGCCCT GGCGCTGATG TGGCGGCCGG CAATTGCGCC GGTCGAACGC
CCGCAAACCT TCGACTCCGC GCAACGGCAA CGCGGCGCAC GAGTGGTCGA GGCTGGCGAC
TGTGCGGTGT GTCATACGCG TCCCGGCGGC CAATACCTGG CCGGTGGACT GCCGCTGGTG
ACGCCGTTCG GCACCCTCTA CAGCACCAAC ATCACTCCGG ATCCACAGAC CGGCATCGGC
CAATGGTCGC TGCCGGCCTT CGAGCGGGCG ATGCGTGAAG GGATCTCCCG CGACGGCCAC
TTCCTGTACC CGGCCTTCCC TTACGTTCAT TACCGGCGCA TGAGCCAAGA CGACATCGCC
GACGCCTATG CGTACCTGAT GAGCGGCCCG GCCGTGGACT CGCCGCCACA ACAAAACCGC
ATGAACTTCC CGATGAACAT CCGGCCACTG GTGTCGTTCT GGAACCTGCT GTTCCTGCAC
GGAAAGCCGC TGACACCGCT GGCGGAGCAA TCGCAGGCGT GGAATCGCGG ACGCTACCTG
GTCGAGGGGC CCGGTCACTG CGCGGGCTGT CATTCGCCGT TGAACCTGAT CGGCGCCGAG
AAATCCGGCG AAAACCTGGC CGGCGGCAGC GTGGATGGCT GGGACGCGCC TTCACTGCTG
GGCATGGCGC ACCGGGCAAA CCCGTGGAGC AGCGAGCAAC TGGTGAGTTA CCTGCGGGCC
GACGTGGTCG ACGGACACGG CACGGCGGCG GGCCCGATGC GCCCGGTCAG TCTCGGTCTG
GCGCGCTTGC CCGCGGAAGA TGCTCAGGCG ATTGCCGAGT ACCTGCTGAG TCTGCCGGCG
AAAACCGCGA TCAACGAAAT TCCGAGCGCC AGCGCTGAAC CTGCGGATCG ATCCTCTGGC
GCGCTGCTGT TCGCCAGTGC CTGCGCCGGC TGCCATGCCC AAGGCGCGCC GATGCGTGAC
ATCGACGGCC GCCCGGCACT GGATCGCACC TCGGCGCTGC AGGCTGCCAG CCCGCGCAAC
TTTGTGAAAA CCGTACTCGA AGGCATCCCG GCAGAACCCG GCCAGCCGGG GCCGGTAATG
CCCTCATTCG CCGCCAGTCT CGACAACGCT CAACTCGACG CCCTGGCCGT CTACCTGCGC
CATCAGGCCA GCCCCGACCA ACCGTGGACC GACCTTCCTG CCACCCTCCA AGCGCTACGT
CAGGAGACGA AATGA
 
Protein sequence
MNGHFMRSRT LWISAAALAS IGAIAALALM WRPAIAPVER PQTFDSAQRQ RGARVVEAGD 
CAVCHTRPGG QYLAGGLPLV TPFGTLYSTN ITPDPQTGIG QWSLPAFERA MREGISRDGH
FLYPAFPYVH YRRMSQDDIA DAYAYLMSGP AVDSPPQQNR MNFPMNIRPL VSFWNLLFLH
GKPLTPLAEQ SQAWNRGRYL VEGPGHCAGC HSPLNLIGAE KSGENLAGGS VDGWDAPSLL
GMAHRANPWS SEQLVSYLRA DVVDGHGTAA GPMRPVSLGL ARLPAEDAQA IAEYLLSLPA
KTAINEIPSA SAEPADRSSG ALLFASACAG CHAQGAPMRD IDGRPALDRT SALQAASPRN
FVKTVLEGIP AEPGQPGPVM PSFAASLDNA QLDALAVYLR HQASPDQPWT DLPATLQALR
QETK