Gene Pfl01_2443 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2443 
Symbol 
ID3715300 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp2795287 
End bp2796189 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content61% 
IMG OID 
ProductDNA-binding transcriptional activator GcvA 
Protein accessionYP_348174 
Protein GI77458668 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.586469 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.671238 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCCCC GATTGCCATC GCTTAACGGA TTGCGCGCCT TCGAATGCGC CGCCCGGCAT 
ATGAGCTTCA CCCGCGCCGC CGAAGAACTG AACGTCACGC AGACCGCGAT CAGCCATCAG
ATCCGTCGCC TCGAGGATGA GCTTGGCGTG CGTCTGTTCA TGCGCTTGAA GGACGGTTTG
GCGTTGACCG AGGAGGGCAA TGCTTACTTG CCCGGCATTC GTTCGGCGTT TCTTGAATTG
CGCTACTCGA CTGAAAAGCT GCTGGAATCC AGCCACAACA GCGTCCTGAC CATCAGCACG
CTGGTGTCGG TGGCATCGAA ATGGTTGTTG CCGCGATTGC CATCGTTTCG CGAGGCGCAT
CCGGACATTG ATGTGCGGAT CAGTGCTTCC ACCGAGTGGG TGGACTTTCG CAAGGGCGGC
ATCGATGCGG CGATCCGCTA CGGCGACGGG AATTGGCCTG GACTTCGGGC CGACTGGTTG
ATGGCCGACG AGATCTTTCC GGTATGCAGC CCGCGCTTGC TGACCGGCGA CAAGCCGTTG
AATACGCCGG CGGACCTGGC CCATCACCCT TTGCTGCAAG TCAGCGGCGT GACCGCCAAT
GACTGGAACG ACTGGCTGCA TGCGGCAGGC CAGCCACCGC TGACGGCCAA AGGCCCACGA
TTGACCTTCG ACCTGGCGAT GATGGCGGTG CAGGCGGCGA TTGACGGGCA GGGCGTGTGC
ATCGGTCGCT CGACCTATGT CGATGACGAT CTGCGCGCAG GCAGGCTGGT GGCGCCGTTT
GATTTGCGCT TGAAATCCGC TTCCGGCTTC TATCTCGTCA CGCCCCACGA TCAGGCCGAA
TCGAAAAAGA TCGTGGCGTT CAGAGGCTGG CTATCGCAGG TGCTGGCCAA ACCCTTTGTA
TAA
 
Protein sequence
MLPRLPSLNG LRAFECAARH MSFTRAAEEL NVTQTAISHQ IRRLEDELGV RLFMRLKDGL 
ALTEEGNAYL PGIRSAFLEL RYSTEKLLES SHNSVLTIST LVSVASKWLL PRLPSFREAH
PDIDVRISAS TEWVDFRKGG IDAAIRYGDG NWPGLRADWL MADEIFPVCS PRLLTGDKPL
NTPADLAHHP LLQVSGVTAN DWNDWLHAAG QPPLTAKGPR LTFDLAMMAV QAAIDGQGVC
IGRSTYVDDD LRAGRLVAPF DLRLKSASGF YLVTPHDQAE SKKIVAFRGW LSQVLAKPFV