Gene Pfl01_2439 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2439 
Symbol 
ID3715335 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp2792396 
End bp2793145 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content64% 
IMG OID 
ProductShort-chain dehydrogenase/reductase SDR 
Protein accessionYP_348170 
Protein GI77458664 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.427983 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.121811 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAACA GACTTGAAGG CAAAATCGCA CTGATCACTG GCGGCACCAC CGGCATCGGC 
CTGGCTTCGG CGCAGGAATT CGTCGCCCAG GGCGCCACGG TATTCATCAC CGGCCGCCGT
CAGGCCGAAC TGGACAAAGC GGTCGCCGCC ATCGGCCCAC GGGCCATCGG CATTCAGGGC
GATGTGGCGA AGCTGGAGGA TCTGGATCGC ATCTACAGCG AGATTTCCGC CAAGGCCGGG
CACCTCGACA TCCTGTTCGC CAACGCCGGC GGCGGGGACA TGCTGCCGCT GGGCTCGATC
ACTGAAGAGC ACTTCGACCG GATTTTCGAC GCCAACGTGA AGGGCACGCT GTTCACCGTA
CAGAAGGCCT TGCCGCTGCT GCGCGATGGC GCCTCGATTC TGCTGACCTC GTCGACCACG
TCGGTGCAGG GCACGGAGAA CTTCAGCGTC TACAGCGCGA GTAAAGCGGC GGTGCGCAAC
TTCGCCCGCT CATGGTTGCT GGACCTGAAA CCACGGCGTA TCCGCGTCAA CGCCATCAGC
CCTGGCCCGG TGCGCACGCC AGGGCTGGCA GGGCTGGTGC CGGCGGAACA CACCCAGGGG
CTGTTCGATC AACTGGCGTC TATCGTGCCG ATCGGGCGTC TGGGCGAGCC GAGCGAGATT
GCCAAGGCCG CGCTGTTCTT GGCCTCGGAT GACAGCAGCT TCGTCAATGG CATCGAGTTG
TTCGTCGACG GCGGTACTGC GCAGATCTGA
 
Protein sequence
MSNRLEGKIA LITGGTTGIG LASAQEFVAQ GATVFITGRR QAELDKAVAA IGPRAIGIQG 
DVAKLEDLDR IYSEISAKAG HLDILFANAG GGDMLPLGSI TEEHFDRIFD ANVKGTLFTV
QKALPLLRDG ASILLTSSTT SVQGTENFSV YSASKAAVRN FARSWLLDLK PRRIRVNAIS
PGPVRTPGLA GLVPAEHTQG LFDQLASIVP IGRLGEPSEI AKAALFLASD DSSFVNGIEL
FVDGGTAQI