| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_2438 |
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| Symbol | |
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| ID | 3715334 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | - |
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| Start bp | 2791335 |
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| End bp | 2792231 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_348169 |
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| Protein GI | 77458663 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.565253 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.132387 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCAGT TAATGGCGAT CCGCACCTTC GCCCGCGTCG TGGAAAGCGG TTCGTTCACC
AAAGCCGCCG ACTCGCTGAA CCTGCCGAAA ACCACGGTCA GCAAACTGAT CGGCCAGCTG
GAAAACCACC TCGGCGTGCG CCTGCTGCAA CGCACCACCC GCCGCCTCAC CGTCACCGCC
GACGGCGCTT CCTATTACCA ATTGACCCAA CAACTGCTGC ATCAACTGGA CGACATCGAT
CAAGGCTTCA GCCAGGCCCA AGGCCTGCCG CGCGGCAAAA TTCGCGTGGA CATCGGCGGC
TCGACCGCAA CGATGTTGGT GATCCCCGAA CTGCCGAAGT TCTTCGAACG CTATCCGGAC
ATCCAGGTTG ATCTGGGCGT CAGCGACCGC CCGGTGGACC TGATCAGTGA GCGGGTGGAC
TGCGTGATTC GCGGCGGCCC GCTGACCGAA CAAACCCTGG CAGTGCGCCG CCTCGGCGAA
GTGTCCTGGA CCACCTGCGC CACGCCCGAT TATCTGCAAC GCCACGGCAC CCCGAGCCAC
CCGCTCGACC TGGCCAGCCA TCAGCTGATC GCCTACCGCT CGGCCTCCAC CGGGCGCATC
CTGCCGTCGA ACTTCCAGCG CAACGGCGAA CGCCACCAGA TCGAAGGCAA AGGCCTGATC
AGCGTCAACG AGAGCAACGC GCACCTGGCG GCCGGGCTCG CCGGACTGGG GATCATCCAC
ACCTTCAGCT ACACGGTCAG GACCGCCATC GAGCGCGGCG AACTGGTGCC GATCCTCGAG
GACTGGCGCC CGCCGGCCTA TCCGTTTCAT GTGCTGTACC CGCCAAACCG ACATTTGAGC
AATCGGGTGC GGGTGTTTAT CGATTGGCTG GTGGAGCGGT TTGCGCAGGT TGATTGA
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| Protein sequence | MNQLMAIRTF ARVVESGSFT KAADSLNLPK TTVSKLIGQL ENHLGVRLLQ RTTRRLTVTA
DGASYYQLTQ QLLHQLDDID QGFSQAQGLP RGKIRVDIGG STATMLVIPE LPKFFERYPD
IQVDLGVSDR PVDLISERVD CVIRGGPLTE QTLAVRRLGE VSWTTCATPD YLQRHGTPSH
PLDLASHQLI AYRSASTGRI LPSNFQRNGE RHQIEGKGLI SVNESNAHLA AGLAGLGIIH
TFSYTVRTAI ERGELVPILE DWRPPAYPFH VLYPPNRHLS NRVRVFIDWL VERFAQVD
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