| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_2435 |
|---|
| Symbol | |
|---|
| ID | 3715331 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | - |
|---|
| Start bp | 2788352 |
|---|
| End bp | 2789191 |
|---|
| Gene Length | 840 bp |
|---|
| Protein Length | 279 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | |
|---|
| Product | ThiJ/PfpI |
|---|
| Protein accession | YP_348166 |
|---|
| Protein GI | 77458660 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.0616899 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.239889 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCTCAA TGACACGTCT TGCTTTCGCC CTGTCTCTCT CCGTTGCCGC GTTGAACGCC
CAGGCGGCCA ATGTGCTGGT GGTGCTGTCG GACTCCGATC ATCTCGATCT GAAGGACGGC
AAGGTCTTCA GCACCGGTTT CTACCTCAAC GAACTGATGC AACCGGTCAA GCTGCTGCTC
GATGCCGGCC ACACCGTGAC CTTCGCCACC CCGACCGGCA AGGCGCCGAC GCTGGATCGC
TCCTCCGACG ACAAGATGTA TTTCAACAAT GACGTGGCAG CCTTGCAGAC CCACAAGGCG
CTGCTGGAAC AACTGAAGAT CACCTCGCCC GGTGAATCGC CGGTTATCAG CCTGTCGCGG
GTGGAGCAAG TCGGCTACGA GCATTTCGAT GCCGTCTACA TTCCGGGTGG CCACGCACCG
ATGCAGGATC TGCTGCACAG CCAGGCGCTG GGCAAACTGC TGAACAACTT CCATCAAACA
GGCAAAACCA CAGCCCTTGT GTGCCACGGC CCGATTGCAC TGCTGTCGAC CCTGACGGAT
CCGACCGCAT TCACCCGCCA ACTGGAAACC GGCAAAGCCA CGACGGCAAA CAACTGGACG
TATGCCGGCT ACACATTCAC GGTCATCAGC AATCAGGAAG AAGAAATCGC CAAAGGTCTG
TTGAACGGCG GTGCGATGAA GTTCTATCCG CAGACGGCAC TGGAGAAGGC TGGCGGTGTT
TTCAGCAGTA ACACGGCGCC GTGGGCCAGC CACGTAGTGG TTGATCGCGA ACTGGTCACC
GGACAGAACC CGGCGTCGGC CCTGGCCGTG GGCAAGACCC TCGTTGACCG CTTGAAGTGA
|
|---|
| Protein sequence | MRSMTRLAFA LSLSVAALNA QAANVLVVLS DSDHLDLKDG KVFSTGFYLN ELMQPVKLLL
DAGHTVTFAT PTGKAPTLDR SSDDKMYFNN DVAALQTHKA LLEQLKITSP GESPVISLSR
VEQVGYEHFD AVYIPGGHAP MQDLLHSQAL GKLLNNFHQT GKTTALVCHG PIALLSTLTD
PTAFTRQLET GKATTANNWT YAGYTFTVIS NQEEEIAKGL LNGGAMKFYP QTALEKAGGV
FSSNTAPWAS HVVVDRELVT GQNPASALAV GKTLVDRLK
|
|---|
| |