Gene Pfl01_2429 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2429 
Symbol 
ID3715325 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp2783567 
End bp2784469 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content41% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_348160 
Protein GI77458654 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0395939 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0645708 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGAGA CTGTTAAAGC GGTTAAAGCT CATGGCTCCT ACGAGGCGCG AGACCTGATT 
TCGTATCTTT CTATAATTTA CTCACTTTCC GATGAGCCTA CTGGTCCACG CTGTTATCGT
GGCCAGTCTG TTAGTTCCTG GAAAGTTAAG CCTTCTGTGA TGAGGGAGCT GAGGTCTGAT
GCGGAACGTC AGATACTTAG CGAACTTTTA GTAGAGGCGC CGAATGAGTT TGGTTCAGAT
AAAAGCATGT TTGATAAGTT GGTTCGTGCA CAGCATTATA GCCTGCCTAC ACGACTTCTT
GATGTTACTT TAAATCCACT TGTAGGGCTG TACTTTGCGT GCGAAGAAGA GAAATTTCAG
TCTGAAGATG GTGTGGTTCA AGTATTTGAT TTTCAGAAAG GTAGGGAAAA ATTTTCAGAC
AGTGACACGG TTAGTGTTAT ATGTAATTTA TCTAGACTTT CTGATGTCGA AAAAAAGAAA
ATAATTAATA GATACGATGT GGTTGGACCA AGAGTGGCGG ATTGGAGCGA GTCGAATAAG
AAAATGTTTA GGCTGATGCC TGAGGTGAAG AGGTTGATGC AATTTGTGCG GGTTGAGAAG
CCCTATTTTC TAGACAAGAT CAATCCATTG GATTTATTCA GGTATTATTT TGTTTATCCT
TCAAAAAACA ACAGGCGAGT AATAGCTCAA TCGGGTGCAT TTATAGCTGC TGGGCTTTTG
CAATATCATT CGCTCGAACA GTCGGCTGGG CTGAAGCACA AAAAAATTAT AATTCCATGT
CAATGTAAGA AGAAAATAGT AGCTCAGCTT GATGCTTTGA ATATCAACTC AAGAACTATG
TTTCCTGAGG TTGAGTTTAC TTCAAAATAC ATAAAGAAGA AGTGGGCCGT TGGTTCGGAT
TGA
 
Protein sequence
MAETVKAVKA HGSYEARDLI SYLSIIYSLS DEPTGPRCYR GQSVSSWKVK PSVMRELRSD 
AERQILSELL VEAPNEFGSD KSMFDKLVRA QHYSLPTRLL DVTLNPLVGL YFACEEEKFQ
SEDGVVQVFD FQKGREKFSD SDTVSVICNL SRLSDVEKKK IINRYDVVGP RVADWSESNK
KMFRLMPEVK RLMQFVRVEK PYFLDKINPL DLFRYYFVYP SKNNRRVIAQ SGAFIAAGLL
QYHSLEQSAG LKHKKIIIPC QCKKKIVAQL DALNINSRTM FPEVEFTSKY IKKKWAVGSD