Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_2420 |
Symbol | |
ID | 3715412 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 2775792 |
End bp | 2776796 |
Gene Length | 1005 bp |
Protein Length | 334 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | |
Product | LysR family transcriptional regulator |
Protein accession | YP_348151 |
Protein GI | 77458645 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 51 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0259227 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAAGG GGCGGCCTCC TGTGAGGTCG CCCCTATACT CTTTCCACCT GACTGTTGAG ACGACACCGA TGGACGTCTT CCAAAGCATG CGCTTCTTCA TCGCCGTCGC CCAAAGCGGC AGCTTCACCG CCGCTGCCGA GATGCCGGAC ACCAATACCA CCAACGTCTC CAAAGCGATC TCTGCTCTCG AAGCGCGCCT GCATACGCGG CTGATCAATC GCACCACCCG CCGTCTGGCC CTGACCGAAG CCGGCGTGCG CTATCTGGAA CGCTGCGAAA AAATCCTCGA TGACGTGCGC GAAGCCGACG AAGAAGCCGG CACCGCCCAG ACCCTGCCCG TCGGCCGCTT GAAGATTCAC ACCATGTCGG CCATCGGCAA CCACTACGTG ATCGATGCCA TCGCCCGCTA TCGCGACATT CACCCCACGG TGATGTTCGA TCTGACCCTG ACCAACCGCG TCCCCGACCT GCTCGAAGAA GGCTTCGACA TGTCCATCGT GCTGGCCCGC GACCTGCCGG ATTCCGGCTT CGTCGCGCAA CGTTTGGGCA TCACCTACAG CATTCTTTGC GCCTCGCCCG CCTATGTGGC CAAACGCGGT CTGCCGCAAA CACCGGGCGA GCTTTGCGAA CACGAGTGTC TGCGCATCGT CAACACGGTG ATGCCGGTGG AAAACTGGAC ATTCGAAGGG CCCGAAGGCA TGGAAACCAT CAGCATTCCC GTATCACCCT TCCACATCAA CACCGCCGAC GGCATGACCA TCGCGATCAG AAAAGGCATG GGCATCGGTA TTCAGCCGAT TGCTTCGGCC GTGGATGGTT TGAGGGCGGG AACTTTGGTG CGGGTGTTGC CGGAGTACCG GCTGGAGGAG TTGAACCTGT TCGCGATCTA TCCGTCGCGC AAGTTCGTCG ATGCGAAGAT CAAGACCTGG GTGGAGTTTC TGAAGCAGTC GATCCCGCAA TTGCTGGCAT CGGATGAAGA CATCGTTGGA AAGAAAGCGG TTTGA
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Protein sequence | MAKGRPPVRS PLYSFHLTVE TTPMDVFQSM RFFIAVAQSG SFTAAAEMPD TNTTNVSKAI SALEARLHTR LINRTTRRLA LTEAGVRYLE RCEKILDDVR EADEEAGTAQ TLPVGRLKIH TMSAIGNHYV IDAIARYRDI HPTVMFDLTL TNRVPDLLEE GFDMSIVLAR DLPDSGFVAQ RLGITYSILC ASPAYVAKRG LPQTPGELCE HECLRIVNTV MPVENWTFEG PEGMETISIP VSPFHINTAD GMTIAIRKGM GIGIQPIASA VDGLRAGTLV RVLPEYRLEE LNLFAIYPSR KFVDAKIKTW VEFLKQSIPQ LLASDEDIVG KKAV
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