Gene Pfl01_2408 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2408 
Symbol 
ID3715401 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp2766700 
End bp2767617 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content60% 
IMG OID 
ProductMarR family transcriptional regulator 
Protein accessionYP_348140 
Protein GI77458635 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00944596 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCCACAA TCACCGACCG CGCCGACATC GTTCGGCAAT TCAACCGCTT CTATACTCAC 
CAGATCGGCG TGTTGCAGGA GCATCTGCTG CAAAGCGATT ACTCGCTGAC CGAGCTGCGC
ATCCTCTACG AACTCGCGTC CGGCGGTGAC CTCACCAGCG CCGACCTGCG CCAGATGCTC
GGCCTCGACG CGGGCTACAT GAGTCGCCTC ATCAGCGGTT TCGACAAAAA GGGCCTGATC
CAGAAAGTCC CCTCCGCCAC CGACGCCCGC GCCAGTCAAT TGCACATCAC CGACCTCGGC
CGCGAAACTC TCGCCCCGCT GGAACAGGCC TCGCGACAAG AAGTCATCAC CCTGCTCGAA
CGCCTGTCTG AACCGCAGCA ACTGCAACTG ATCGCCTCGA TGAAGCAAAT ACAGACGCTA
CTCGAGGGCG GCCAGTCGAC GACCTATCTG TTGCGCGATC CGCAGCCCGG TGACATGGGC
CTGGTGGTGC ATCAACAGAC CGCAATCTAC AGCCGTGAAT ACGGCTGGAA TTCAGAGTTC
GAAGCGCTGG TGGCAGAGGT TGTTGCCAAG TACCTGCGCG AATTCGACCC CAGCGGCGAG
CGCTGCTGGA TCGCGGAAAA GGACGGCAAG GTGGTGGGTT CGGTATTCGT CATCCGCCAC
GACGAAACCA CCGCGAAACT GCGCATGCTC TACGTGGATG CCAGCGCGCG GGGCCTGGGG
ATCGGCAATC GGCTGGTCGA AGAATGTCTG CGTTTTGCCC GGGATGTCGG TTACAAGAAG
ATGATTTTGT GGACCACCAG CAATCTGGTG GATGCCCGCC GGTTGTATCA GCGGGCGGGG
TTTGAGTTGG TCGAGGAAGA GCCGATTCAC AGCTTCGGCA AAGAGCTGGT GAGTCAGACA
TGGGCGATCG AGTTGTGA
 
Protein sequence
MSTITDRADI VRQFNRFYTH QIGVLQEHLL QSDYSLTELR ILYELASGGD LTSADLRQML 
GLDAGYMSRL ISGFDKKGLI QKVPSATDAR ASQLHITDLG RETLAPLEQA SRQEVITLLE
RLSEPQQLQL IASMKQIQTL LEGGQSTTYL LRDPQPGDMG LVVHQQTAIY SREYGWNSEF
EALVAEVVAK YLREFDPSGE RCWIAEKDGK VVGSVFVIRH DETTAKLRML YVDASARGLG
IGNRLVEECL RFARDVGYKK MILWTTSNLV DARRLYQRAG FELVEEEPIH SFGKELVSQT
WAIEL