Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_2398 |
Symbol | |
ID | 3715450 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 2760163 |
End bp | 2760633 |
Gene Length | 471 bp |
Protein Length | 156 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | |
Product | protein tyrosine phosphatase |
Protein accession | YP_348130 |
Protein GI | 77458625 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00798695 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCGCGTTC TATTCATGTG CACCGCCAAC AGCTGCCGCA GCATTCTGTC GGAGGCGATG TTCAATCACT TGGCGCCGGC CGGTTTCGAA GCAGTCAGTG CCGGCAGTTT CCCCAAGGGC CAGGTGCTGC CGCGCAGCCT GACCACGTTG CAGGCGGCCG GCATTTCCAT CGCCGGGTTG AGCAGCAAGG GCAACGAGGC CTTCGAAGAC AATCCGCCGG ACATCGTCAT CACCGTGTGC GACAAGGCCG CCGGTGAAGC CTGCCCGGTG TATTTCGGCC CGGCCCTGAA AGCCCATTGG GGGCTGGAAG ATCCGTCGGA TGTGGTCGGC GATGAACGCA CCATTGATGC CGCCTTCCGC GCCACCCTCG CCCAAATCGA AACCCGCTGC CGGGCCTTCC TCGCCCTGCC CTTCGCCGAA CTTGACCGTG ATGCCCTCAA GCGCGAGCTC GACCGCATCA GCACGCTGTA A
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Protein sequence | MRVLFMCTAN SCRSILSEAM FNHLAPAGFE AVSAGSFPKG QVLPRSLTTL QAAGISIAGL SSKGNEAFED NPPDIVITVC DKAAGEACPV YFGPALKAHW GLEDPSDVVG DERTIDAAFR ATLAQIETRC RAFLALPFAE LDRDALKREL DRISTL
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