Gene Pfl01_2394 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2394 
Symbol 
ID3715446 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp2753724 
End bp2754980 
Gene Length1257 bp 
Protein Length418 aa 
Translation table11 
GC content64% 
IMG OID 
ProductCzcC family heavy metal RND efflux outer membrane protein 
Protein accessionYP_348126 
Protein GI77458621 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.794005 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00223071 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACATTCA AGTGCAATTG CACGGGTTGG CCTCTGGTGG CCGGCCTTGC GGCAAGCGTG 
CTCGCGTGGC CGGGTTTCGC CACCGCGCTG ACACTCGATC AAGCGCTGCG GCTGGCCGAA
AACAATGCGC CGTCGCTGAC CGCACAAGAT CAGAAAATCC AGGCCGCCAG CAGTGCGGCC
ATTCCGGCGG GCGAGTTGCC CGATCCCAAG CTGTTGCTCG GTTTGCAGAA CTACCCCGTG
GGCGGCCCGG ATCGCTGGAG CGTCGATCAG GACTTCATGA CCATGCAGAT GGTCGGTTAC
CGGCAGGAGA TGCCCAACGC AGACAAACGC AAGGCGCGCA TCGAAGTTGC CGACGCCGCT
ATTGAGCGCG CGGCGGCCGA GCGCAGGGTC GAGCGTTTGA AGGTGCGTCA GGCGACAGCG
CTGGCGTGGA TCAGCGGCTA TTCGGTCGAG CGTAAGGAAG CGCTGTTCCG GGATCTCTTC
AAGGAAAATC GCCTGCTGAG TGAGACCGTC CGGGCGCAGA TCGCCGGTGG CCGCGCGCAA
CCTGCCGACG CGGTGACGCC GAAGCAGGAA GCGGCCCGAC TCGCCGAGCA ACAGGACAAC
CTGACCCTCG AGCGTACTCT GGCCCGAGCC GCGCTCAAAC GCTGGATCGG CAGCGCCGCC
AACGACAAGC CCGAGGGCGG TTTGCCCGTG TGGCCGGTCG ATGCCTCGAC CTTCAATCAT
CAACTGCAAC ACCATCCCGA ACTCGCTGCT TTCGCGCCCA TGACCCGCGA AGCCCAGGCC
AGGGTGCAAG AGGCGGTGTC CGAGAAAAAG TCCGACTGGA GCTGGGAGGT AGATTACCAG
CACCGGGGGC GCGAGTTTGG CGACATGGTC AGCGTGCAGT TTTCCTGGGA TCTGCCGCTG
TTTCCCGAGA CGCGGCAGAA CCCGAAAATC GCCGCCAGAC AGGCCGAGGT CAGCCAACTG
CAAGCCGAGC GCGAGGCCCT GTCCCGCGAG CACACCGAAC AACTGGAAAA CCAGTTGGCC
GATTACCAGC GCCTCGATCG GGCCGTACGC CGCACCGAAG AAAGCCTGGT GCCGCTGGCC
AGAGAGAAAG TCGATCTGAG CCTGGCCAGT TATCGCGCCG GCCAGGGCGA TTTGAACGCG
GTGGTCAACG CCCGCCGCGA ACTCATCGAG GCCCGCCTCA AACAGATCGA CATGGAAGAA
CAACGCGCGC TGACCGCTGC GCGTCTGCAT TTCGCTTATG GGGAGACCAG CCTGTGA
 
Protein sequence
MTFKCNCTGW PLVAGLAASV LAWPGFATAL TLDQALRLAE NNAPSLTAQD QKIQAASSAA 
IPAGELPDPK LLLGLQNYPV GGPDRWSVDQ DFMTMQMVGY RQEMPNADKR KARIEVADAA
IERAAAERRV ERLKVRQATA LAWISGYSVE RKEALFRDLF KENRLLSETV RAQIAGGRAQ
PADAVTPKQE AARLAEQQDN LTLERTLARA ALKRWIGSAA NDKPEGGLPV WPVDASTFNH
QLQHHPELAA FAPMTREAQA RVQEAVSEKK SDWSWEVDYQ HRGREFGDMV SVQFSWDLPL
FPETRQNPKI AARQAEVSQL QAEREALSRE HTEQLENQLA DYQRLDRAVR RTEESLVPLA
REKVDLSLAS YRAGQGDLNA VVNARRELIE ARLKQIDMEE QRALTAARLH FAYGETSL