Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_2361 |
Symbol | |
ID | 3715509 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 2719391 |
End bp | 2720359 |
Gene Length | 969 bp |
Protein Length | 322 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | |
Product | LysR family transcriptional regulator |
Protein accession | YP_348093 |
Protein GI | 77458588 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.111143 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTATAGTT GGCGTCCCTT TTCCAGCGAA TCTCGCCCCG TGCTAGACCT CAATGACCTG CAGTATTTCG TGATGGTGGT GGACCACGGC GGCTTTGCGC CGACGGCGCG GGCGCTGGGG ATTCCCAAAT CGAACCTGAG CCGGCGCATT GCCTTGCTTG AGGAGCGTCT GGGCGTGCGC CTGATCATCC GCAACACCCG GCACTTCTCG GTGACGGAGC TGGGCCAGAC CTACTACGAC CATTGCCGGG CGATGCTGAA ACAGGCCGAG GCCGCCGAAG CCGCGATTGC CATGACCCGC GCCGAACCGG GCGGCGTGTT GCGCGTGACC TGTCCGACGA CGCTGCTGGA AGAATGCGTC GGCGGGATCA TCACGCGCTT CATGGCCATG CACCCGCGCG TCGAAATGCA TCTGGAGGCC AGCGACCGGC AGGTCGACGT GGTGGCCGAA GGTGTCGATC TGGCGTTGCG GGTGCGGCCG CCGCCCTTGC AGGATTCCGA GCTGGTCAGC CGGGTGCTGT CGCAGCGGCC GCAGTGCCTG GTCGCCAGCC CTGCGCTCTT GAGCCGGCTG GGTGAACCGA GCGAGCCGGA AGACCTGTCG CGCTTCCCCA GCGCTCACCA CGGCAGCCCG CAGCAGGTTT ACAGCTGGAC GCTGTTCCAT CAGGACGGTT CCGAGTTCAC CCTACAACAT CGCCCGCAAT TGATCACCAA AGGCCTGCCG ATGCTGCGCT GCGCGGCCAT CGACAGCGTC GGCGTTGCGC AGATGCCAAT GTCGCTGGTG CATGACTTCA TCGAACGCGG CCAACTGGCG GTGGTGCTGC CCGACTGGGC GCCGCGTACG GAGATGATCT ACGCGGTGTT TGCCAGCCGT CAGGGCATGC TGCCGTCGCT GCGGATGCTG ATCGACTTCA TGGCCGAGCA GTTCGAGTTG CTGGACGATC CGCTGCGCGG AATGCGTACA AAAGCCTGA
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Protein sequence | MYSWRPFSSE SRPVLDLNDL QYFVMVVDHG GFAPTARALG IPKSNLSRRI ALLEERLGVR LIIRNTRHFS VTELGQTYYD HCRAMLKQAE AAEAAIAMTR AEPGGVLRVT CPTTLLEECV GGIITRFMAM HPRVEMHLEA SDRQVDVVAE GVDLALRVRP PPLQDSELVS RVLSQRPQCL VASPALLSRL GEPSEPEDLS RFPSAHHGSP QQVYSWTLFH QDGSEFTLQH RPQLITKGLP MLRCAAIDSV GVAQMPMSLV HDFIERGQLA VVLPDWAPRT EMIYAVFASR QGMLPSLRML IDFMAEQFEL LDDPLRGMRT KA
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