Gene Pfl01_2361 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2361 
Symbol 
ID3715509 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp2719391 
End bp2720359 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content65% 
IMG OID 
ProductLysR family transcriptional regulator 
Protein accessionYP_348093 
Protein GI77458588 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.111143 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTATAGTT GGCGTCCCTT TTCCAGCGAA TCTCGCCCCG TGCTAGACCT CAATGACCTG 
CAGTATTTCG TGATGGTGGT GGACCACGGC GGCTTTGCGC CGACGGCGCG GGCGCTGGGG
ATTCCCAAAT CGAACCTGAG CCGGCGCATT GCCTTGCTTG AGGAGCGTCT GGGCGTGCGC
CTGATCATCC GCAACACCCG GCACTTCTCG GTGACGGAGC TGGGCCAGAC CTACTACGAC
CATTGCCGGG CGATGCTGAA ACAGGCCGAG GCCGCCGAAG CCGCGATTGC CATGACCCGC
GCCGAACCGG GCGGCGTGTT GCGCGTGACC TGTCCGACGA CGCTGCTGGA AGAATGCGTC
GGCGGGATCA TCACGCGCTT CATGGCCATG CACCCGCGCG TCGAAATGCA TCTGGAGGCC
AGCGACCGGC AGGTCGACGT GGTGGCCGAA GGTGTCGATC TGGCGTTGCG GGTGCGGCCG
CCGCCCTTGC AGGATTCCGA GCTGGTCAGC CGGGTGCTGT CGCAGCGGCC GCAGTGCCTG
GTCGCCAGCC CTGCGCTCTT GAGCCGGCTG GGTGAACCGA GCGAGCCGGA AGACCTGTCG
CGCTTCCCCA GCGCTCACCA CGGCAGCCCG CAGCAGGTTT ACAGCTGGAC GCTGTTCCAT
CAGGACGGTT CCGAGTTCAC CCTACAACAT CGCCCGCAAT TGATCACCAA AGGCCTGCCG
ATGCTGCGCT GCGCGGCCAT CGACAGCGTC GGCGTTGCGC AGATGCCAAT GTCGCTGGTG
CATGACTTCA TCGAACGCGG CCAACTGGCG GTGGTGCTGC CCGACTGGGC GCCGCGTACG
GAGATGATCT ACGCGGTGTT TGCCAGCCGT CAGGGCATGC TGCCGTCGCT GCGGATGCTG
ATCGACTTCA TGGCCGAGCA GTTCGAGTTG CTGGACGATC CGCTGCGCGG AATGCGTACA
AAAGCCTGA
 
Protein sequence
MYSWRPFSSE SRPVLDLNDL QYFVMVVDHG GFAPTARALG IPKSNLSRRI ALLEERLGVR 
LIIRNTRHFS VTELGQTYYD HCRAMLKQAE AAEAAIAMTR AEPGGVLRVT CPTTLLEECV
GGIITRFMAM HPRVEMHLEA SDRQVDVVAE GVDLALRVRP PPLQDSELVS RVLSQRPQCL
VASPALLSRL GEPSEPEDLS RFPSAHHGSP QQVYSWTLFH QDGSEFTLQH RPQLITKGLP
MLRCAAIDSV GVAQMPMSLV HDFIERGQLA VVLPDWAPRT EMIYAVFASR QGMLPSLRML
IDFMAEQFEL LDDPLRGMRT KA