| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_2330 |
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| Symbol | |
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| ID | 3715515 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | + |
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| Start bp | 2687203 |
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| End bp | 2691924 |
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| Gene Length | 4722 bp |
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| Protein Length | 1573 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | |
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| Product | RHS protein |
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| Protein accession | YP_348062 |
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| Protein GI | 77458557 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.361613 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAACTG GGGGCGGTGG TGCGAAACAG CGTGAGCCGC AAGTCGCGGT GGTACCCCTC
AACACGATCG ATATTCAGGA TGTCGGACGC GGCGCTGCCA AATTCGATGC CTGGTTGCAG
TCCATCAGCG GCGGTGTCGT CACACTCGAT CGGGTCAAGA ACGTCGCGGG TGCTCTTCCT
GTCGTGGGCA ACATCATGGC GTTGGTTGAT GCCCTCGGAG ACATCGTCAC CCTGGCCAAA
AGCAAACAGC GTCAAGTGCT GGATTGGGTC AGCCTGGGTA TCAACCTGAT TGGTGTATTG
CCTGCGCCAC CGACCATGGC TTCTGCGCGC ATGACACTAC GCCCGACCCT GGGGCTGGTG
CGTCAGGAAC TGCGTAACAG CGCCAAGATG CTGCTGGGGG ACTCTCTGAT TGAAGTGTTG
ATCGGGCATC TGAACGCGAC CATCGTCGGC ACCATCGATG ACTTCGTCAA ACAGGCACAA
CCCAAACTGG CGGGCATTCT CGACGACGCT GGAAAACTGG GTCAAAGCGC GGTGAACGAG
ATCGCCAAGG GCCTGGAAAA GGTGGTCAAC GGCAAGCTCG ATGCGAAGGG AGACCTCAAT
GCGGCCGGTT CGAAAATCAC GGCGGCGCGC GGTCAGTTGT TGCATGACCC CAAGGCGGCT
ATCAGCAACA TTTTCGGTGC CGCTTTCAGT GCCTACAAGG CTGCAGGCAA AGGCGTTGCC
AACAGTGCCG CCAAGAACTT GCTGCCGGAG AAAGCCAAGG CTCTGGTACT GAGCAACACA
TCGATGCTTC GCACGCTGGG GGTGGAGCTG CAATCCCAGA TGAAAAAGCT TGGTGACCCG
GGCGTTCAGC ATTCCATCGG CTGGCTGTTG CAGATGTTGG CGGGCTCTGT AGTAACTTGG
CGCAAACGTC GCTCTCATGG TCAGGCCGCC AGTGTCAAAC CGGGGGCCAC GAGCAAGGCA
GAACAACGCG CCGGCAAAGG CCAACTGGAG TTGCAGCAAA GCCAGGCTCG AGCCCGTTCT
GATGCCAGTG ATTGCAAGAA TCGCGTCCCG ACAGGCACGA AAAGAAACAT CAGCTTTGCA
CGCGGCACGG AAACCATCAC CCACACGGAT TTCCGTTTGC CGGGCCCGTT TCCCGTCGTC
TGGAACCGTA CTTATTACTC GAATCTGGAG GCCTACGACA AAGGCAGCCT GGGTGCTCGC
TGGATCAACG AGTTCACCAC TTGTTTCGAT TATGTGGATG ACGGGTTGGT CTTTCATGCG
GCCGATGGCC GAAGTCATGA GTTTGCGTTG CCCAAAGTCG GCGAAGCCCA TCATGACCCG
ATTGAAAACC TGACTCTGAT TCGCTCAGGT GAAAATCAAT TGCTGCTGTG CCGCGGCGTC
GAGCGAAAGG AGACCTACGT GCGTCGTGGG GCACGCTTTC TGCTCGCCGG CATCGAGCTG
CGCAGCGGTG CTGGAATCAT GCTGCACTAT GAGCACATGC ATGGTGATGA GCCGGTGCTC
TCTGACCTGC TCACCTATCA GGGGGACGTT ACAAAGGTTC ATCTACAACT CGGAACACTG
ATCGATGACC ACGGACGTCT GACAGGTTTG TGGGAGATCG CCGATGGCAT TCCTCAGCGC
CAACTGTGTG CCTATCACTA TGATGCGTTG GGCGATCTGG TTCAGGCACG GGATGAAAAC
GGTTATGCCT GGAATTATGA ATTTCGCAGC CATCTGATCA CGCGATACAC CGACCGGACC
GGGCGGGGCA TGAATTTGCA ATGGCAGGGG GACGGCTCCG ATGCCAAAGC GATTCGTGAA
TGGGCGGATG ATGGAAGCTT CGATACTCGA CTTGAGTGGG ACGAAAACAT TCGTCTGACC
TACGTCACTG ACGCTCACGG CAATGAGACC TGGCACTACT ACGACATTCT TGGCTACACG
TACCGTATCC GTCATCCGGA TGAGCGTTCG GAGTGGTTGT TCCGCGATGA GGCCAAAAAT
GTCGTGCGAC ATGTCCACAC CGATGGAAGC GTTGATCGGT TCAGCTACGA CGAGCGTGGC
AATCTTCTCG AACACATCCG TGCCGATAAC ACCGTAATGC ATTACGCATA CGATGATCTG
GACCAACTGA TCAAGGTTAG TGATGCAGAG GGCGGACAGT GGACCAGAGC TTATGACGAC
AGCGGCAATC TTGTGGAAGC TGTCGATCCT CTGGGTAACA AGACGGAGTA CACCTACACA
TCTGCCGGTT ATCCGGAGAC CGTCAAGGAT GCTAACGGAG CAGAGAAGAA ATTCGAATAC
AACGATGCCG GTCAGTTGAC CGGGTACACC GATTGTTCCG GCAAAACCAG TACCTGGGAG
TACAACGGCC TGGGTCAGTT GATTTGCTTT ACCGATGCGG CAGGGCAAAG CACCGAGTAT
GAGTATGTGG CAGGTCAACT GGTGTTGATC AGGCATCCGG ACAAGTCTGA GGAGCGTTTC
AGTCGCGATG CCGAAGGGCG ACTGTTGGCC CATGTCGACG GCCTGAACCG CTGCACCACC
TGGAACTACA GCGCCGCCGG CCTTATCGCC GAGCGAGTGG ATGCGGCTGA GCAAACGTTG
CGCTATCGCT GGGACCGTCT CGGTCGTTTG ACCGCTTTGG AGAACGAAAA TGAGCGTAGC
GCCCATTTTC ACTACGATCC GATGGGGCGG TTATTGGAGG AAACAGGTTT CGACGGCCAT
ATTACGCGCT ACCAGTACGA CACTGAATCA GGTCGTTTGA GCAGCAAGCT TGATGGCGAG
CGGCGAGTGG CTTTCCAATT CGACCTGATG GGCCGTCTGA TAGAGCGCCT TGCGAGTCTG
GGCGAACAGG TACAAAGTGA AACATTTGCC TACGATGGCA ACGGCAATAT GACACTGGCT
GAAAATGATC ACAGTCGCTT GCAGTGGTTC CACGATCCGG CGGGCAACCT GCTGCGTGAA
CATCAGCATT ATCTGAGTCT GGAGCAGCCT CGGATCGCAG TCTGGCAACA TGAATACGAT
GCCCTGAATC AGCGAGTAGC GACTGTGCGT CCGGATGGCC AAAGAGTCAG TTGGATGACC
TACGGCAGCG GGCACTTGCT GGGATTGAAA GTGGATGACC ACGAGTTGCT GGCCTGGGAG
CGTGATGATC TGCATCGCGA AATCGCCCGT CATCAGGGCA ACCATTTATT GCAGACGCAG
AAGTGGGACC CGGCTGGGCA GTTGCAGGAG CAATTGTTGG GTCGTAGCGA TGACAAGCGC
ACGTTGCTCA AGCGTGAATA TCAATATGAT CCTGCGGGCC AACTGATCCT TCTCAACGAC
ACGCGACGCG GGCCGCTGAC GTATCAGTAC GATCCGGTGG GGCGCCTGAT CAAGGCGGCG
AGTCGACAGG GTGTGGAAAC TTTCGCCTTT GATCCTGCCG GTAACTTGCT TGATGAGCCG
GTTGAACAGA TGCGCCGACC TCTGGATCAG GACCCGATGC GTAGCAAGCG GGTGGACAAC
CTGCTGCGCG AGTACTCGGG TACCCACTAT GAATACGATG ATCGAGGCAA TCTGATACAG
CGTTGGCACA ACGGCAGTAT CGCCAGAATG CGCTGGGATT TGTTCGACCG TTTGGTTCAC
TTTGATGATG CCCGACTGGA AGTCGAGTAT GCCTACGATG TATTGGGACG CCGTCTTTAC
AAGAACTCGA CTGCGCATTT CAAGCGACGG CCTGAAGCCG GATCACAGTG GAACGACAAT
GAGTTTGTCC GCAAGCAGCG AGAGTCGGGT TGTGGTTTCA CATTGTATGG CTGGGACGGC
GATACGCTGG CCTGGGAGAG CAGTCCGGCT CTGCTGGATG GTGATCCCGG ACGCACGGTG
CATTACATCT ATGAGCCGGG TACTTACATT CCGGTTGCGC AAGCTTTGCG ACACCAGCCA
ATCATTCTGA TGGGGCAGCC TGACTTCAGC GGCGAGTATC AATTGGAGGA CGACCCGCTG
TGGAACCACG TACCTGTGGC ACTGCCAATC GACGTGTTGA GTTGGTATCA ATGCGACCGA
ATGGGGACGC CTCTGGAGTT GACCGACCAG AATGGCGAAA TAGCCTGGAG CGCTCAGTAC
AAGGCATGGG GGAGCGTGTC TGAGCAGCGT TCGCCAATGG CGCAGCAACA GGGTATTGGC
AACCCGATTC GCCTCCAGGG GCAATATCAC GATCATGAAA CGGGGCTGCA TTACAATCGT
TATCGTTATT ACGATCCGTT GATTGGACGC TTCATCAGCA AAGATCCCAT CGGTTATGAC
GGTGGGCTGA ACCTCTTTGT ATATGCGCCG AGTCCACTGG GCTGGATTGA CCCGCTAGGC
TTGGCAAGAT GTCCGTGTGC CGATCTGAAG AAAGGCAACC CTGAAGGAAC CGGGCCATTC
AGAGGTGGAT CTTACGGAGG CACCACGGCC TCGGGGATCG AGTCGCATCA CATGCCGGCA
GACAGCACCA GTCCGATTAA GAGAAGCCAG GGGCCAGCAA TACAAATGGA GCCCTATGAC
CATAGCCAAA CAATGAGTCA CGGCCACCAG GGTAATCCCG GAAAAGCCTA TCGAGCTCAG
GTTCAGTCAA AAATCGAAGT GGGAGACATG AGAGGTGCAA TGGCGATGGA GATCAGAGAT
GTGCGCCGTG TAGCCACTCA GGTCGGACAA CCCAGAAAGT ACAATGAAGC AATGCAAGAA
ATGCTGGCGT ATGCCAAGTG CCGTAAATTT CTGGATAAGT GA
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| Protein sequence | MTTGGGGAKQ REPQVAVVPL NTIDIQDVGR GAAKFDAWLQ SISGGVVTLD RVKNVAGALP
VVGNIMALVD ALGDIVTLAK SKQRQVLDWV SLGINLIGVL PAPPTMASAR MTLRPTLGLV
RQELRNSAKM LLGDSLIEVL IGHLNATIVG TIDDFVKQAQ PKLAGILDDA GKLGQSAVNE
IAKGLEKVVN GKLDAKGDLN AAGSKITAAR GQLLHDPKAA ISNIFGAAFS AYKAAGKGVA
NSAAKNLLPE KAKALVLSNT SMLRTLGVEL QSQMKKLGDP GVQHSIGWLL QMLAGSVVTW
RKRRSHGQAA SVKPGATSKA EQRAGKGQLE LQQSQARARS DASDCKNRVP TGTKRNISFA
RGTETITHTD FRLPGPFPVV WNRTYYSNLE AYDKGSLGAR WINEFTTCFD YVDDGLVFHA
ADGRSHEFAL PKVGEAHHDP IENLTLIRSG ENQLLLCRGV ERKETYVRRG ARFLLAGIEL
RSGAGIMLHY EHMHGDEPVL SDLLTYQGDV TKVHLQLGTL IDDHGRLTGL WEIADGIPQR
QLCAYHYDAL GDLVQARDEN GYAWNYEFRS HLITRYTDRT GRGMNLQWQG DGSDAKAIRE
WADDGSFDTR LEWDENIRLT YVTDAHGNET WHYYDILGYT YRIRHPDERS EWLFRDEAKN
VVRHVHTDGS VDRFSYDERG NLLEHIRADN TVMHYAYDDL DQLIKVSDAE GGQWTRAYDD
SGNLVEAVDP LGNKTEYTYT SAGYPETVKD ANGAEKKFEY NDAGQLTGYT DCSGKTSTWE
YNGLGQLICF TDAAGQSTEY EYVAGQLVLI RHPDKSEERF SRDAEGRLLA HVDGLNRCTT
WNYSAAGLIA ERVDAAEQTL RYRWDRLGRL TALENENERS AHFHYDPMGR LLEETGFDGH
ITRYQYDTES GRLSSKLDGE RRVAFQFDLM GRLIERLASL GEQVQSETFA YDGNGNMTLA
ENDHSRLQWF HDPAGNLLRE HQHYLSLEQP RIAVWQHEYD ALNQRVATVR PDGQRVSWMT
YGSGHLLGLK VDDHELLAWE RDDLHREIAR HQGNHLLQTQ KWDPAGQLQE QLLGRSDDKR
TLLKREYQYD PAGQLILLND TRRGPLTYQY DPVGRLIKAA SRQGVETFAF DPAGNLLDEP
VEQMRRPLDQ DPMRSKRVDN LLREYSGTHY EYDDRGNLIQ RWHNGSIARM RWDLFDRLVH
FDDARLEVEY AYDVLGRRLY KNSTAHFKRR PEAGSQWNDN EFVRKQRESG CGFTLYGWDG
DTLAWESSPA LLDGDPGRTV HYIYEPGTYI PVAQALRHQP IILMGQPDFS GEYQLEDDPL
WNHVPVALPI DVLSWYQCDR MGTPLELTDQ NGEIAWSAQY KAWGSVSEQR SPMAQQQGIG
NPIRLQGQYH DHETGLHYNR YRYYDPLIGR FISKDPIGYD GGLNLFVYAP SPLGWIDPLG
LARCPCADLK KGNPEGTGPF RGGSYGGTTA SGIESHHMPA DSTSPIKRSQ GPAIQMEPYD
HSQTMSHGHQ GNPGKAYRAQ VQSKIEVGDM RGAMAMEIRD VRRVATQVGQ PRKYNEAMQE
MLAYAKCRKF LDK
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