Gene Pfl01_2327 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2327 
Symbol 
ID3715512 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp2682421 
End bp2683335 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content63% 
IMG OID 
Productcatechol 1,2-dioxygenase 
Protein accessionYP_348059 
Protein GI77458554 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGTGA AGATTGCCCA CACTGCCGAA CTGCAAAAAT TCTTCGAAGA AGCCGCCGGT 
TTTGCCAACG ATGGCGGCAG CTCGCGCTTG AAAACCATCG TCCTGCGAGT GTTGCAGGAC
ACCGCCCGGA TCATCGAAGA CCTTGAGATC AGCGAAGACG AATTCTGGAA AGCCGTCGAT
TACCTCAACC GTCTGGGCGG CTGCTCGGAA GCCGGGCTGC TGGTGGCCGG CCTCGGCCTC
GAGCATTTTC TCGACTTGCT GCAGGATGCC AAGGATGCGC AGATCGGCTT GACCGGCGGC
ACGCCGCGCA CCATCGAAGG CCCGTTGTAC GTGGCCGGCG CGCCGCTGTA CGAAGGGGAA
TGCCGGATGG ACGACGGCAG CGAGGAGGGC GTCGCCACGC TGATGTTGCT CGAAGGTCAG
GTGTTCGATC CGCAGGGCCA GCCGCTGGCC GGCGCCACGG TCGACCTGTG GCACGCCAAC
ACCAAAGGTA CTTACTCGTT CTTCGACCAG AGCCAGTCCG AATACAACCT GCGCCGGCGG
ATCATCACCG ATGCTGAAGG CCGCTACCGC GCCCGCAGCA TCGTGCCCTC CGGTTATGGC
TGCGACCCGC AGGGCCCGAC CCAGGAATGC CTCGACCTGC TCGGCCGCCA CGGCCAGCGC
CCGGCTCATA TTCACTTCTT CATTTCCGCA CCGGGACACC GGCACCTTAC GACGCAGATC
AATCTGTCCG GGGACAAGTA TCTGTGGGAT GACTTCGCGT ACGCGACCCG TGAAGGGTTG
GTCGGGGAGG TCGAGTTTCT GGAAGATGCA GCGGGACGTC GTGCTGAATT GAAGTTCGAC
TTCCAGTTGC AGCAGGCTCC GGACGCGGCG GCGCAACAGC GCAGTCAGCG GCCACGGGCG
TTGCAGGAAG TCTGA
 
Protein sequence
MTVKIAHTAE LQKFFEEAAG FANDGGSSRL KTIVLRVLQD TARIIEDLEI SEDEFWKAVD 
YLNRLGGCSE AGLLVAGLGL EHFLDLLQDA KDAQIGLTGG TPRTIEGPLY VAGAPLYEGE
CRMDDGSEEG VATLMLLEGQ VFDPQGQPLA GATVDLWHAN TKGTYSFFDQ SQSEYNLRRR
IITDAEGRYR ARSIVPSGYG CDPQGPTQEC LDLLGRHGQR PAHIHFFISA PGHRHLTTQI
NLSGDKYLWD DFAYATREGL VGEVEFLEDA AGRRAELKFD FQLQQAPDAA AQQRSQRPRA
LQEV