Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_2324 |
Symbol | benD |
ID | 3715548 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 2680172 |
End bp | 2680933 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | |
Product | 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase |
Protein accession | YP_348056 |
Protein GI | 77458551 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAACA GATTCGCCAA CAAGGTCGCG CTGGTCACCG GCGCGGCGCA GGGCATCGGT CGCCGGGTGT GCGAGCGCTT CCTGGAGGAG GGCGCGCAGG TCATTGCCGT CGACCGCTCC GGACTGGTTC ACGAACTGCA AGGCGAGGGC GTGCTGTCGC TGACCGCCGA CCTTGAGCAA TACGCCGATT GCGCCCGGGT GATGAGCGCC GCCGTCGATA CGTTCGGGCG TCTGGATGTG CTGGTCAACA ACGTCGGCGG CACCATTTGG GCCAAGCCGT TCGAGCACTA CGAAGTCGAG CAGATCGAGG CCGAAGTGCG CCGTTCGCTG TTCCCGACGC TTTGGTGCTG CCACGCCGCA TTGCCGTACA TGCTCAAGCA GGATCGCGGG GCGATCGTCA ATGTGTCGTC GATTGCGACC CGCAGCCTGA ACCGTGTTCC CTACGGCGCG GCCAAGGGCG GGATCAATGC ACTGACCGCC TGTCTGGCCT TCGAGAATGC CGAGCGCGGG ATCCGGGTTA ACGCCACCGC GCCCGGCGGC ACCGAAGCGC CGCCTCGGCG CATCCCGCGC AACGCCGCCG AACAATCCGC GCAGGAGCAG GCCTGGTATC AGGAAATCGT CGCGCAAACC CTCGATAGCA GCCTGATGAA ACGCTACGGA ACCATTGACG AACAGGTCGG CGCGATCCTG TTTCTCGCCT CGGACGACGC CTCCTACATC ACCGGTGTAA CCCTGCCGGT CGGTGGCGGA GACCTCGGTT GA
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Protein sequence | MNNRFANKVA LVTGAAQGIG RRVCERFLEE GAQVIAVDRS GLVHELQGEG VLSLTADLEQ YADCARVMSA AVDTFGRLDV LVNNVGGTIW AKPFEHYEVE QIEAEVRRSL FPTLWCCHAA LPYMLKQDRG AIVNVSSIAT RSLNRVPYGA AKGGINALTA CLAFENAERG IRVNATAPGG TEAPPRRIPR NAAEQSAQEQ AWYQEIVAQT LDSSLMKRYG TIDEQVGAIL FLASDDASYI TGVTLPVGGG DLG
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