Gene Pfl01_2310 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2310 
Symbol 
ID3715534 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp2664880 
End bp2665650 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content62% 
IMG OID 
ProductAraC family transcriptional regulator 
Protein accessionYP_348042 
Protein GI77458537 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.141971 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGAACG CGTTTGCGAT CCTGTGCCAG GGCGATGAGC GCCATCGGCC GCATACCCTC 
GACGCACTGC TGGCCGGCGT GGCACCGCTG TTGCCGATGC TGGACGTGAT TCCGAACGCG
GCGATCTTCA TCAAGGATGT GCAGGCGCGG TACGTCCTGG CCAATCGCAC GCTGGTGCAA
CGCTGCGGCC TGAAAGACTT GAAACCGCTG CTCGGGAAAA CCAGTGCGCA GGTATTTCCG
GCGCAACTGG GACCGGGTTA TACCGAGCAG GATCGGCGGG TGCTGGAAGA GGGATTGGTG
CTGGAGGATC AGCTGGAACT GCACCTGTAC GGCAGTCGCG AACCGGGTTG GTGCCTGACG
CACAAGCGTC CGCTGTACAA CCGTGACGGC GAGATCATCG GCCTCGCGGG GATTTCGGTG
GATCTGCAAT CAGCCGCCGA AACACATCCA GCATTCCAGA GACTGGCGGC GGTCGATGAA
CACATCCGCG CGCATTTCAA TCGGCGGGTG ACATTGAGCG AATTGACCCG AATCGCCGGT
ATCTCGGTGG CGCAACTGGA ACGCTATTGC AAACGGGTGT TCCACCTGAC GCCGAGGCAG
ATGATCCAGA AGGTGCGGCT GGATCATGCC CACCGCTTGT TGCTCACCGA GCTGCCGATC
ACCGAGGTGG CGCTGCAATG CGGCTACACC GATCACAGCG CATTCACTCG GCAGTTCAAG
GCATCGACCG GGTTCACCCC GCGCCAGTAC CGGCAGGCGA CGGAACGTTG A
 
Protein sequence
MQNAFAILCQ GDERHRPHTL DALLAGVAPL LPMLDVIPNA AIFIKDVQAR YVLANRTLVQ 
RCGLKDLKPL LGKTSAQVFP AQLGPGYTEQ DRRVLEEGLV LEDQLELHLY GSREPGWCLT
HKRPLYNRDG EIIGLAGISV DLQSAAETHP AFQRLAAVDE HIRAHFNRRV TLSELTRIAG
ISVAQLERYC KRVFHLTPRQ MIQKVRLDHA HRLLLTELPI TEVALQCGYT DHSAFTRQFK
ASTGFTPRQY RQATER