Gene Pfl01_2304 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2304 
Symbol 
ID3715587 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp2656950 
End bp2658125 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content62% 
IMG OID 
ProductAraC family transcriptional regulator 
Protein accessionYP_348036 
Protein GI77458531 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0753369 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACCG TACCGCCTGT TCACCGCATC GCCCTGTTGT TCAACGGCAG CAAGATCTAT 
GACCGCGGCA TCATCAGCGG CATCGGCAAC TACCTGAGCA GCACGCGCGC GTCTTGGGAC
CTGTTTCTGG AAGAGGATTT TCTCTGCCGC TTGAAAGGTA TCGAGCGTTG GCAAGGTGAC
GGGATCATCG CCGACTTCGA CGATCCGCTG ATTGGCGAGG CGCTGGCCGA TATCAAGTTG
CCCGTGGTAG CGGTGGGTGG TTCTTATCAG GATGAGCGGG CCTATCCCAA AGGCATCCCG
TACGTCGCGA CCGACAATAA CGCGCTGATC ACCATGGCTT ACGAGCACTT GATCGAGGCC
GGGTTGCAAC GGTTTGCCTG TTTCAGCCTG CCGGAGGCGC AGGCCAACCG CTGGGCCCAG
GAACGCGAAA AGGCTTTTCT GCGATTGATG CAACGGGACG GCTCGCACGG CGAGGTCTAT
CGCGGCATGG GCACCAGCGC GCCGCTGTGG GACAGCGCCG TCGAACAGTT GATCGCCTGG
CTGCAAAGCC TGCCCAAGCC CATTGGCATC ATCGCGGTCA GTGACGCCCG TGCCCGGCAG
TTGCTGCAAG CCTGCCTGAC CGCCGGCATC GCCGTTCCGG AACAGGTGGC GTTGATCGGC
ATCGACAACG ACCCACTGAC CCGCAGCCTG ACCCGGGTCC CGCTGAGTTC GGTGATTCAG
GGCACCGAAA CCATGGGCCG CACCGCCGCG CAACTGCTGC ACCAGATGCT GCACGGCAAA
CCGTCAACGG GCGCGCATTT CCTGATCCCG CCCGAAGCGA TCAACGTGCA GGTGTCGAGC
TTGCATCAAC CGTTGGGCAA CCCCTACGTG ATGCAGGCGC TGCTGTTCAT CCGCCAATAT
GCCTGTCAGG GCATCAAGAC CGCGCAAGTG GCGGCCTATG TCGGTGTGTC GCGCTCCTCC
CTGGAATCGC ACTTTCGCGC GGTGCGTGGT TGCAGCGTGC ATGACGAGAT TCTGCGTTTC
AAACTGGCGG CGGCCACTCG CGGACTGGAA AAAACCGACA CAGCGATTGC GGACGTTGCC
CGCACGTGCG GTTTCAAATC CGCACAGTAC CTGCACACGG TGTTTCGCCG GGAGTTCGGG
TGTACGCCCC GTGAATATCA GCAGGGCGCC CGATAG
 
Protein sequence
MKTVPPVHRI ALLFNGSKIY DRGIISGIGN YLSSTRASWD LFLEEDFLCR LKGIERWQGD 
GIIADFDDPL IGEALADIKL PVVAVGGSYQ DERAYPKGIP YVATDNNALI TMAYEHLIEA
GLQRFACFSL PEAQANRWAQ EREKAFLRLM QRDGSHGEVY RGMGTSAPLW DSAVEQLIAW
LQSLPKPIGI IAVSDARARQ LLQACLTAGI AVPEQVALIG IDNDPLTRSL TRVPLSSVIQ
GTETMGRTAA QLLHQMLHGK PSTGAHFLIP PEAINVQVSS LHQPLGNPYV MQALLFIRQY
ACQGIKTAQV AAYVGVSRSS LESHFRAVRG CSVHDEILRF KLAAATRGLE KTDTAIADVA
RTCGFKSAQY LHTVFRREFG CTPREYQQGA R