Gene Pfl01_2290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2290 
Symbol 
ID3715573 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp2639456 
End bp2640685 
Gene Length1230 bp 
Protein Length409 aa 
Translation table11 
GC content43% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_348022 
Protein GI77458517 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.18336 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTGCT GTAAAAAAGA GAAGGTATCA AAGGGATGCC AGACTGGGAA TCTTATGATC 
GTAGGTTTTA GCGTTAACGG CTTCAAATCA CTAGCCAACT TTAGTCTTGA CGAAAAGACG
GGACTGGGTA ACTTTACTTG CCTCGTTGGA TTAAACGGGG CTGGAAAAAG CAGCGTACTT
CAACTTCTAG ACTTTGCCTC CCACCTAATG CGCGGCGACG TTACCAATTG GCTATCAAAA
CGCGGCTGGA GCGTTTCGGA CTTGCATTCA AAACTGTCCA ATAGTTCCAA CATCATCATC
GGAATAACGG TAAGGGTCAA AAGCGGAAAA CTTTTTTCGT GGGTCGGAAG CTTCAACAGG
AGCAGCCTTT CCTGCACACT AGAGAGAATA TTTGAAGCCG AGGGCGAATA TATATTCAAT
CTTACGAGAG GCCGATATTC CATACTTAAC ACACAACCAT CTAAGATCGA GTTTAACTAT
GTCGGCTCCA TCCTTTCTGC GCTAAAGGAT GACGTATTAA GCCCGGAAAT AATTGAAGTA
AGAAATGCAA TATTAAACAT TAGATCACTA GAACTCCTAT CCCCTCACCT AATGAGAAAC
TCATCGCGAG AAGCCGCGAT AGACATTGGC ACCGGTGGAG AAAAGCTTTC TCCGTATCTC
TACAATATAA AAGGCAAAGA ACGAGAAAAA CTCACAGCGC TATTGCGAGA GTTCTACCCT
GCCGTACTAG ACTTTAAAGT TAAGCAGGAA AGAGCCGGCT GGAAAAAACT ATCAATCATT
GAAGAATTCA ATGGAGAGAT TATTGAAACT GAAGCCAAGC ACGTTAACGA TGGGCTACTC
AGGATATTGG CGATTCTTGC TCAAGCGGGA TCGGGCAATG CAACACTTCT GTTTGATGAA
GTTGAAAATG GAGTTAACCC TGAAATCGTA GAGCGCCTTG TTCATTTACT ACAGAATACA
GGTCAGCAAG TTATCGTCAC CACACATAGT CCAATGATCT TAAATTACTT ATCCGATGAA
GTAGCTGAGA AATCTGTACA TTTTGTGTAT CGTACATTTG ATGGTGGCAC CCGGAGTCGG
CCGCTGTTCA GCATTCCGAG AATGCAAAAA AAACTAGCAA TAATGGGCCC TGGCGAGGCT
TTTGTAGACA CAAGCCTAAC TAATCTCACT AGTGAATGTG CAAAGCTCGA TGCGGATGAA
AGCTCTAATT TGGAAAAGGG TGCTATGTGA
 
Protein sequence
MNCCKKEKVS KGCQTGNLMI VGFSVNGFKS LANFSLDEKT GLGNFTCLVG LNGAGKSSVL 
QLLDFASHLM RGDVTNWLSK RGWSVSDLHS KLSNSSNIII GITVRVKSGK LFSWVGSFNR
SSLSCTLERI FEAEGEYIFN LTRGRYSILN TQPSKIEFNY VGSILSALKD DVLSPEIIEV
RNAILNIRSL ELLSPHLMRN SSREAAIDIG TGGEKLSPYL YNIKGKEREK LTALLREFYP
AVLDFKVKQE RAGWKKLSII EEFNGEIIET EAKHVNDGLL RILAILAQAG SGNATLLFDE
VENGVNPEIV ERLVHLLQNT GQQVIVTTHS PMILNYLSDE VAEKSVHFVY RTFDGGTRSR
PLFSIPRMQK KLAIMGPGEA FVDTSLTNLT SECAKLDADE SSNLEKGAM