Gene Pfl01_2282 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2282 
Symbol 
ID3715623 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp2633206 
End bp2634441 
Gene Length1236 bp 
Protein Length411 aa 
Translation table11 
GC content58% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_348014 
Protein GI77458509 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATGAAC GAAAGGACAA ATCAGTGGCT GTTCAAAAGG ACATTCCCCG GGTTCCCAAC 
CCACCGGCGG GCGACGGGCA TCACGTCACC TACCGCTACA TGACGGCCAC CGAACTGGCC
GATCAGCAAG ACCGACAAGA CAAGTACGAC GCCATGCTGG CGAGGCAGGA CGCCTTCGAG
CGTAGCCGTG AGGTGGCGGC GAACAAGCCT GATGCGGTGC GTGCCGGCTG CGTGTTTGCC
AAGTCCTGCA GGTTGCCGGA CGCGATCATC GATTACTCAA ATCCGTCGGG GATGGTGCCG
ACAGACAGCC TGAAGGACTA CGGCGAGCTG ATTTTGCTCG GTGGCCGTGA GGCCGATGAC
AGCGGTGGGG TTGAGCTCAA GAAAATCAGC GGCACGGCCA TTCCTGCGGG GCTGGGCACT
TTCGCCCTTG CCGGTGAGGG GTTCAAGGCA TTGCCCGCGA TGGCCTCTGC TGCCGTCATC
AGCCCGTTGC TCGGGCTGGT GGCGATGTTC ATGCCCTCGA ACCTGGGCGA TAGCGCGCTT
TACACCGAAG ACCAGTTGCT CGCCCTCAAA CAGGCCCGAA CCCGCGTGCG CTTGCGCGTT
GAACAGCAGG CCGATGGCAG CCTCAAGGGG TACGGCTTCT ATACCGGCAA GAATCGCGAT
TGGGAGATGG TTGATGTCGT GCAGTTCACG GCACGCGATA GCCGGTTTGT TGCAGACCTC
GGTGACGGTG TTGAGCTGAT CTGGACGCCT GCCGTGGATG GTTCCGACAT CCTCGGGATT
CCTGCGCTGG AGGCTGCTCC GCAGGCGCCG CATATCTGGG TGTATCCGCC GACGAAAGCG
GCGGACGGGA TTCTGGTTAA TCCGGTTTAT CCGCCGGAGT ATCGGGATTT CATTTTGGTG
TTTCCGGCAG AGTCGGGGGT TAAGCCGGTA TACATTGTTG TCAGCATCCA CGCGGGGGAC
CACGAGTACC ATCCGGCTCC TGACGTGCTC CCAGCCTTTC CTGATGCAAG AATCGTAGGC
CGTAAAACGT CTGTACAAGG TGGTGGGGCG AAGCGCAAAA GATGGAAAAC TGCTAAGGGC
TTGATTCTTG AGTGGGACTC TATGCACGGT ACGGTCGAAA AATATGATGC GAGAGGTAAA
CACCTCGGAG AGTTCGATCC GAACACAGGC GAGCCGACAT CTACAAAAAA GAATAAAAAA
TCTAAAAAAG GCAAGAAAAG GAGCATTGAA CCTTGA
 
Protein sequence
MHERKDKSVA VQKDIPRVPN PPAGDGHHVT YRYMTATELA DQQDRQDKYD AMLARQDAFE 
RSREVAANKP DAVRAGCVFA KSCRLPDAII DYSNPSGMVP TDSLKDYGEL ILLGGREADD
SGGVELKKIS GTAIPAGLGT FALAGEGFKA LPAMASAAVI SPLLGLVAMF MPSNLGDSAL
YTEDQLLALK QARTRVRLRV EQQADGSLKG YGFYTGKNRD WEMVDVVQFT ARDSRFVADL
GDGVELIWTP AVDGSDILGI PALEAAPQAP HIWVYPPTKA ADGILVNPVY PPEYRDFILV
FPAESGVKPV YIVVSIHAGD HEYHPAPDVL PAFPDARIVG RKTSVQGGGA KRKRWKTAKG
LILEWDSMHG TVEKYDARGK HLGEFDPNTG EPTSTKKNKK SKKGKKRSIE P